ICEberg
ICEberg ID377
NameICESa2603
FamilyICESa2603
OrganismStreptococcus agalactiae 2603V/R
Size (bp)54349
GC content [Genome] (%)38 [35]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAE009948 (complete ICE sequence in this genome)
Replicon chromosome (2160267 bp, Project:330) [NC_004116]
Genome coordinates1256680..1311028
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICESa2603 form AE009948
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SAG12381252057..1252665 [-], 60922534265 hypothetical protein
2SAG12391252715..1252945 [-], 23122534266 conserved hypothetical protein
3SAG12411253409..1253684 [+], 27622534267 transposase OrfA, IS3 family
4SAG12431254003..1254293 [+], 29122534268 ISSdy1, transposase OrfA
5SAG12441254329..1255108 [+], 78022534269 ISSdy1, transposase OrfB
6SAG12451255213..1255329 [-], 11722534271 hypothetical protein
7SAG12461255316..1256485 [+], 117022534272 hypothetical protein
8SAG12471256680..1257879 [-], 120022534273  [UniProt]  [KEGG]site-specific recombinase, phage integrase family
9SAG12481257902..1258129 [-], 22822534274  [UniProt]  [KEGG]conserved hypothetical protein
10SAG12491258408..1258632 [-], 22522534275  [UniProt]  [KEGG]transcriptional regulator, Cro/CI family
11SAG12501258813..1260678 [-], 186622534276  [UniProt]  [KEGG]Tn5252, relaxase
12SAG12511260665..1261030 [-], 36622534277  [UniProt]  [KEGG]Tn5252, Orf 9 protein
13SAG12521261037..1261399 [-], 36322534278  [UniProt]  [KEGG]Tn5252, Orf 10 protein
14SAG12531261820..1263127 [-], 130822534279  [UniProt]  [KEGG]transposase, ISL3 family
15merA-11263287..1264927 [-], 164122534280  [UniProt]  [KEGG]mercuric reductase
16merR-11264956..1265348 [-], 39322534281  [UniProt]  [KEGG]mercuric resistance operon regulatory protein MerR
17SAG12571266612..1268741 [-], 213022534282  [UniProt]  [KEGG]cation-transporting ATPase, E1-E2 family
18cadC1268734..1269102 [-], 36922534283  [UniProt]  [KEGG]cadmium efflux system accessory protein
19SAG12591269305..1269604 [+], 30022534284  [UniProt]  [KEGG]conserved hypothetical protein
20SAG12601269658..1270446 [-], 78922534285  [UniProt]  [KEGG]hypothetical protein
21SAG12611270455..1271051 [+], 59722534286  [UniProt]  [KEGG]conserved hypothetical protein
22SAG12621271225..1273312 [-], 208822534287  [UniProt]  [KEGG]cation-transporting ATPase, E1-E2 family
23SAG12641274268..1274714 [-], 44722534288  [UniProt]  [KEGG]transcriptional repressor CopY, putative
24SAG12651275139..1275759 [-], 62122534290  [UniProt]  [KEGG]cadmium resistance transporter, putative
25SAG12661276299..1276757 [+], 45922534291  [UniProt]  [KEGG]hypothetical protein
26SAG12671276791..1277117 [+], 32722534292  [UniProt]  [KEGG]hypothetical protein
27SAG12681277301..1277993 [+], 69322534293  [UniProt]  [KEGG]repressor protein, putative
28SAG12691277996..1278130 [+], 13522534294  [UniProt]  [KEGG]hypothetical protein
29SAG12701278136..1279551 [+], 141622534295  [UniProt]  [KEGG]ImpB/MucB/SamB family protein
30SAG12711279548..1279898 [+], 35122534296  [UniProt]  [KEGG]conserved hypothetical protein
31SAG12721279885..1280193 [+], 30922534297  [UniProt]  [KEGG]conserved hypothetical protein
32SAG12731280202..1280558 [-], 35722534298  [UniProt]  [KEGG]conserved hypothetical protein
33SAG12741280548..1280937 [-], 39022534299  [UniProt]  [KEGG]conserved hypothetical protein
34SAG12751280934..1281161 [-], 22822534300  [UniProt]  [KEGG]hypothetical protein
35SAG12761281215..1282291 [-], 107722534301  [UniProt]  [KEGG]conserved hypothetical protein
36SAG12771282330..1282821 [-], 49222534302  [UniProt]  [KEGG]hypothetical protein
37SAG12781283064..1283354 [-], 29122534303  [UniProt]  [KEGG]hypothetical protein
38SAG12791283368..1283667 [-], 30022534304  [UniProt]  [KEGG]conserved domain protein
39SAG12801283738..1290562 [-], 682522534305  [UniProt]  [KEGG]SNF2 family protein
40SAG12811290611..1291162 [-], 55222534306  [UniProt]  [KEGG]hypothetical protein
41SAG12821291146..1291337 [-], 19222534307  [UniProt]  [KEGG]calcium-binding protein, putative
42ssp-51291338..1296233 [-], 489622534308  [UniProt]  [KEGG]agglutinin receptor
43abiGI1296512..1297102 [+], 59122534310  [UniProt]  [KEGG]abortive infection protein AbiGI
44abiGII1297099..1297944 [+], 84622534311  [UniProt]  [KEGG]abortive infection protein AbiGII
45SAG12861298030..1300831 [-], 280222534312  [UniProt]  [KEGG]Tn5252, Orf28
46SAG12871300833..1303163 [-], 233122534313  [UniProt]  [KEGG]Tn5252, Orf26
47SAG12891303556..1304410 [-], 85522534314  [UniProt]  [KEGG]Tn5252, Orf23
48SAG12901304429..1304671 [-], 24322534315  [UniProt]  [KEGG]hypothetical protein
49SAG12921306506..1306994 [-], 48922534316  [UniProt]  [KEGG]hypothetical protein
50SAG12931307071..1307655 [-], 58522534317  [UniProt]  [KEGG]protease, putative
51SAG12941307658..1307891 [-], 23422534318  [UniProt]  [KEGG]conserved hypothetical protein
52SAG12951307900..1308283 [-], 38422534319  [UniProt]  [KEGG]conserved hypothetical protein
53SAG12961308294..1308722 [-], 42922534320  [UniProt]  [KEGG]conserved hypothetical protein
54SAG12971308706..1310061 [-], 135622534321  [UniProt]  [KEGG]C-5 cytosine-specific DNA methylase
55SAG12981310113..1310208 [-], 9622534322  [UniProt]  [KEGG]hypothetical protein
56SAG12991310210..1311028 [-], 81922534323  [UniProt]  [KEGG]conserved hypothetical protein
57SAG13001311025..1311198 [-], 17422534324 conserved hypothetical protein
58rplL1311397..1311762 [-], 36622534325 ribosomal protein L7/L12
59rplJ1311826..1312326 [-], 50122534326 ribosomal protein L10
60SAG13031312759..1314867 [+], 210922534327 ATP-dependent Clp protease, ATP-binding subunit
61SAG13041314851..1314949 [-], 9922534328 hypothetical protein
62SAG13051314960..1315904 [-], 94522534329 homocysteine S-methyltransferase MmuM, putative
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins49Fasta
(1) Haenni M; Saras E; Bertin S; Leblond P; Madec JY; Payot S (2010). Diversity and mobility of integrative and conjugative elements in bovine isolates of Streptococcus agalactiae, S. dysgalactiae subsp. dysgalactiae, and S. uberis. Appl Environ Microbiol. 76(24):7957-65. [PudMed:20952646] experimental
(2) Davies MR; Shera J; Van Domselaar GH; Sriprakash KS; McMillan DJ (2009). A novel integrative conjugative element mediates genetic transfer from group G Streptococcus to other {beta}-hemolytic Streptococci. J Bacteriol. 191(7):2257-65. [PudMed:19168609] experimental
(3) Tettelin H; Masignani V; Cieslewicz MJ; Eisen JA; Peterson S; Wessels MR; Paulsen IT; Nelson KE; Margarit I; Read TD; Madoff LC; Wolf AM; Beanan MJ; Brinkac LM; Daugherty SC; DeBoy RT; Durkin AS; Kolonay JF; Madupu R; Lewis MR; Radune D; Fedorova NB; Scanlan D; Khouri H; Mulligan S; Carty HA; Cline RT; Van Aken SE; Gill J; Scarselli M; Mora M; Iacobini ET; Brettoni C; Galli G; Mariani M; Vegni F; Maione D; Rinaudo D; Rappuoli R; Telford JL; Kasper DL; Grandi G; Fraser CM (2002). Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae. Proc Natl Acad Sci U S A. 99(19):12391-6. [PudMed:12200547]
 
experimental experimental literature