ICEberg
ICEberg
ICEberg ID378
NameICESdy12394-1
FamilyICESa2603
OrganismStreptococcus dysgalactiae subsp. equisimilis ATCC 12394
Size (bp)50568
GC content [Genome] (%)39 [40]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002215 (complete ICE sequence in this genome)
Replicon[CP002215]
Genome coordinates886112..936679
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICESdy12394-1 form CP002215
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SDE12394_04550881309..883408 [-], 2100323127111 ATP-dependent protease ATP-binding subunit ClpL
2rplJ884816..885313 [+], 498323127112 50S ribosomal protein L10
3rplL885378..885743 [+], 366323127113 50S ribosomal protein L7/L12
4SDE12394_04565885942..886115 [+], 174323127114 hypothetical protein
5SDE12394_04570886112..886930 [+], 819323127115  [UniProt] hypothetical protein
6SDE12394_04575886932..887027 [+], 96323127116  [UniProt] hypothetical protein
7SDE12394_04580887079..888434 [+], 1356323127117  [UniProt] C-5 cytosine-specific DNA methylase
8SDE12394_04585888418..888846 [+], 429323127118  [UniProt] hypothetical protein
9SDE12394_04590888857..889240 [+], 384323127119  [UniProt] hypothetical protein
10SDE12394_04595889249..889482 [+], 234323127120  [UniProt] hypothetical protein
11SDE12394_04600889581..890069 [+], 489323127121  [UniProt] protease, putative
12SDE12394_04605890146..890634 [+], 489323127122  [UniProt] hypothetical protein
13SDE12394_04610890634..892451 [+], 1818323127123  [UniProt] Type IV secretory pathway, VirD4 component
14SDE12394_04615892469..892711 [+], 243323127124  [UniProt] hypothetical protein
15SDE12394_04620892730..893584 [+], 855323127125  [UniProt] hypothetical protein
16SDE12394_04625893646..893999 [+], 354323127126  [UniProt] hypothetical protein
17SDE12394_04640896310..899111 [+], 2802323127127  [UniProt] hypothetical protein
18SDE12394_04645899197..900042 [-], 846323127128  [UniProt] abortive infection protein AbiGII
19SDE12394_04650900039..900629 [-], 591323127129  [UniProt] abortive infection protein AbiGI
20SDE12394_04655900908..905803 [+], 4896323127130  [UniProt] agglutinin receptor
21SDE12394_04660905804..905995 [+], 192323127131  [UniProt] calcium-binding protein, putative
22SDE12394_04665905979..906530 [+], 552323127132  [UniProt] hypothetical protein
23SDE12394_04670906579..913403 [+], 6825323127133  [UniProt] SNF2 family protein
24SDE12394_04675913474..913773 [+], 300323127134  [UniProt] hypothetical protein
25SDE12394_04680913787..914077 [+], 291323127135  [UniProt] hypothetical protein
26SDE12394_04685914173..914811 [+], 639323127136  [UniProt] hypothetical protein
27SDE12394_04690914850..915926 [+], 1077323127137  [UniProt] hypothetical protein
28SDE12394_04695915980..916207 [+], 228323127138  [UniProt] hypothetical protein
29SDE12394_04700916204..916593 [+], 390323127139  [UniProt] hypothetical protein
30SDE12394_04705916643..916939 [+], 297323127140  [UniProt] hypothetical protein
31SDE12394_04710916948..917256 [-], 309323127141  [UniProt] hypothetical protein
32SDE12394_04715917243..917593 [-], 351323127142  [UniProt] hypothetical protein
33SDE12394_04720917590..919005 [-], 1416323127143  [UniProt] ImpB/MucB/SamB family protein
34SDE12394_04725919011..919145 [-], 135323127144  [UniProt] hypothetical protein
35SDE12394_04730919148..919840 [-], 693323127145  [UniProt] repressor protein, putative
36SDE12394_04735920024..920350 [-], 327323127146  [UniProt] hypothetical protein
37SDE12394_04740920384..920842 [-], 459323127147  [UniProt] hypothetical protein
38SDE12394_04745921381..922001 [+], 621323127148  [UniProt] cadmium resistance transporter, putative
39SDE12394_04750922426..922872 [+], 447323127149  [UniProt] transcriptional repressor CopY, putative
40SDE12394_04755922859..923335 [+], 477323127150  [UniProt] hypothetical protein
41SDE12394_04760923483..923689 [+], 207323127151  [UniProt] putative copper-chaperone/transport protein
42SDE12394_04765923828..925915 [+], 2088323127152  [UniProt] cation transporter E1-E2 family ATPase
43SDE12394_04770926089..926685 [-], 597323127153  [UniProt] hypothetical protein
44SDE12394_04775926694..927482 [+], 789323127154  [UniProt] hypothetical protein
45SDE12394_04780927536..927835 [-], 300323127155  [UniProt] hypothetical protein
46SDE12394_04785928038..928406 [+], 369323127156  [UniProt] cadmium efflux system accessory protein
47SDE12394_04800930804..931022 [-], 219323127157  [UniProt] transposase
48SDE12394_04805930986..931387 [-], 402323127158  [UniProt] hypothetical protein
49SDE12394_04810931529..931636 [-], 108323127159  [UniProt] hypothetical protein
50SDE12394_04815931960..932322 [+], 363323127160  [UniProt] hypothetical protein
51SDE12394_04820932329..932694 [+], 366323127161  [UniProt] hypothetical protein
52SDE12394_04825932681..934546 [+], 1866323127162  [UniProt] Tn5252, relaxase
53SDE12394_04830934727..934951 [+], 225323127163  [UniProt] Cro/CI family transcriptional regulator
54SDE12394_04835935230..935457 [+], 228323127164  [UniProt] hypothetical protein
55SDE12394_04840935480..936679 [+], 1200323127165  [UniProt] phage integrase family site specific recombinase
56SDE12394_04845936967..938214 [+], 1248323127166 putative D,D-carboxypeptidase, penicillin-binding protein
57SDE12394_04850938305..939267 [-], 963323127167 polysaccharide deacetylase
58SDE12394_04855939451..940737 [+], 1287323127168 homoserine dehydrogenase
59SDE12394_04860940739..941599 [+], 861323127169 homoserine kinase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins51Fasta
Identified as part of this study from CP002215