ICEberg
ICEberg ID41
NameICEPmiJpn1
FamilySXT/R391
OrganismProteus mirabilis TUM4660
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionAntibiotic resistance genes: blaCMY-2
Species that ICE can be transferred toEscherichia coli; Klebsiella pneumoniae; Salmonella enterica serovar Typhimurium; Citrobacter koseri
Nucleotide SequenceAB525688; AB525230; AB525229; AB525228; AB525227; AB525226; AB525225 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of ICEPmiJpn1 from AB525230
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1prfC316..422 [+], 107262318114  [UniProt] peptide chain release factor 3
Incomplete gene list of ICEPmiJpn1 from AB525229
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1traG1..197 [+], 197262318110  [UniProt] sex pilus assembly protein
2eexS230..661 [-], 432262318111  [UniProt] EexS protein
3setC716..1012 [-], 297262318112  [UniProt] transcriptional activator
Incomplete gene list of ICEPmiJpn1 from AB525228
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1s0731..662 [+], 662262318105  [UniProt] hypothetical protein
2jpn03682..2325 [+], 1644262318106  [UniProt] hypothetical protein
3jpn042329..3756 [+], 1428262318107  [UniProt] hypothetical protein
4traF3997..4328 [+], 332262318108  [UniProt] sex pilus assembly protein
Incomplete gene list of ICEPmiJpn1 from AB525227
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1traN1..53 [+], 53262318101  [UniProt] TraN
2orf64647..1309 [+], 663262318102  [UniProt] hypothetical protein
3orf651400..1487 [-], 88262318103  [UniProt] hypothetical protein
Incomplete gene list of ICEPmiJpn1 from AB525226
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1s052196..1029 [+], 834262318098  [UniProt] hypothetical proteinTA
2s0531022..1960 [+], 939262318099  [UniProt] ync proteinTA
Incomplete gene list of ICEPmiJpn1 from AB525225
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1orf361..72 [+], 72262318094  [UniProt] hypothetical protein
2orf3799..686 [-], 588262318095  [UniProt] hypothetical protein
3traL974..1056 [+], 83262318096  [UniProt] TraL
Incomplete gene list of ICEPmiJpn1 from AB525688
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1prfC179..271 [+], 93262318116 peptide chain release factor 3
2-365..688 [-], 324262318117  [UniProt] hypothetical protein
3-1036..1356 [+], 321262318118  [UniProt] hypothetical protein
4-1349..2563 [+], 1215262318119  [UniProt] hypothetical protein
5xis2774..2974 [+], 201262318120  [UniProt] Xis
6int2991..4232 [-], 1242262318121  [UniProt] Int
7-4234..4503 [-], 270262318122  [UniProt] hypothetical protein
8-4506..5480 [-], 975262318123  [UniProt] hypothetical protein
9-5585..5791 [-], 207262318124  [UniProt] hypothetical protein
10-6190..6360 [-], 171262318125  [UniProt] hypothetical protein
11rumB6399..7706 [-], 1308262318126  [UniProt] RumB
12rumA7675..8124 [-], 450262318127  [UniProt] RumA
13-8652..8969 [-], 318262318128  [UniProt] hypothetical protein
14-8764..9672 [+], 909262318129  [UniProt] hypothetical protein
15-9746..9946 [+], 201262318130  [UniProt] hypothetical protein
16Tn10L9956..11164 [-], 1209262318131  [UniProt] transposaseVF
17bla12265..13410 [+], 1146262318132  [UniProt] beta-lactamase (CMY-2)AR
18blc13504..14037 [+], 534262318133  [UniProt] outer membrane lipoprotein Blc
19sugE14034..14351 [-], 318262318134  [UniProt] quaternary ammonium compound-resistance protein SugEVF
20ecnR14608..15033 [+], 426262318135  [UniProt] entericidin R
21jpn0115067..20565 [+], 5499262318136  [UniProt] hypothetical protein
22dsbC20714..21421 [+], 708262318137  [UniProt] DsbC
23traC21418..22125 [+], 708262318138  [UniProt] TraC
24Tn10R22926..24134 [-], 1209262318139  [UniProt] transposaseVF
25-24437..25363 [+], 927262318140  [UniProt] hypothetical protein
26-25969..26553 [+], 585262318141  [UniProt] hypothetical protein
27-26572..30249 [+], 3678262318142  [UniProt] hypothetical protein
28jpn0230406..34023 [+], 3618262318143  [UniProt] hypothetical protein
29-34023..36692 [+], 2670262318144  [UniProt] hypothetical protein
30-36705..38945 [+], 2241262318145  [UniProt] hypothetical protein
31-38989..41640 [+], 2652262318146  [UniProt] hypothetical protein
32traI41795..41922 [+], 128262318147  [UniProt] TraI
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
regulation Gene may play role in regulation of transfer

ElementNo. of sequencesDownload
Nucleotide sequences7Fasta
Proteins47Fasta
(1) Mata C; Navarro F; Miro E; Walsh TR; Mirelis B; Toleman M (2011). Prevalence of SXT/R391-like integrative and conjugative elements carrying blaCMY-2 in Proteus mirabilis. J Antimicrob Chemother. 66(10):2266-70. [PudMed:21752830] experimental
(2) Harada S; Ishii Y; Saga T; Tateda K; Yamaguchi K (2010). Chromosomally encoded blaCMY-2 located on a novel SXT/R391-related integrating conjugative element in a Proteus mirabilis clinical isolate. Antimicrob Agents Chemother. 54(9):3545-50. [PudMed:20566768] experimental
 
experimental experimental literature