ICEberg
ICEberg ID412
NameTn1806
FamilyTn1806
OrganismStreptococcus pneumoniae AP200
Size (bp)51457
GC content [Genome] (%)31 [39]
Insertion siteType I restriction modification system
Functiontetronasin resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP002121 (complete ICE sequence in this genome)
Replicon[NC_014494]
Genome coordinates818751..870207
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of Tn1806 form CP002121
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SPAP_0859814885..815457 [+], 573306409021 Predicted hydrolase of the alpha/beta superfamily
2SPAP_0860815720..816055 [+], 336306409022 Uncharacterized protein conserved in bacteria
3SPAP_0861816052..816459 [+], 408306409023 Uncharacterized protein conserved in bacteria
4SPAP_0862816472..817638 [+], 1167306409024 hypothetical protein
5SPAP_0863818146..818859 [+], 714306409025 Type I restriction-modification system methyltransferase subunit
6SPAP_0864818937..819182 [+], 246306409026  [UniProt]  [KEGG]hypothetical protein
7SPAP_0865819264..820037 [+], 774306409027  [UniProt]  [KEGG]hypothetical protein
8SPAP_0866820034..820861 [+], 828306409028  [UniProt]  [KEGG]DNA replication protein
9SPAP_0867820854..821339 [+], 486306409029  [UniProt]  [KEGG]hypothetical protein
10SPAP_0868821336..822070 [+], 735306409030  [UniProt]  [KEGG]Uncharacterized phage-encoded protein
11SPAP_0869822048..823859 [+], 1812306409031  [UniProt]  [KEGG]type IV secretory pathway protein VirD4
12SPAP_0870823942..824412 [+], 471306409032  [UniProt]  [KEGG]Predicted transcriptional regulator
13SPAP_0871824681..824875 [+], 195306409033  [UniProt]  [KEGG]hypothetical protein
14SPAP_0872824939..825457 [+], 519306409034  [UniProt]  [KEGG]Uncharacterized conserved protein
15SPAP_0873825495..825917 [+], 423306409035  [UniProt]  [KEGG]hypothetical protein
16SPAP_0874825985..826602 [+], 618306409036  [UniProt]  [KEGG]hypothetical protein
17SPAP_0875826824..827135 [+], 312306409037  [UniProt]  [KEGG]hypothetical protein
18SPAP_0876827137..827352 [+], 216306409038  [UniProt]  [KEGG]hypothetical protein
19SPAP_0877827363..828226 [+], 864306409039  [UniProt]  [KEGG]hypothetical protein
20SPAP_0878828236..828526 [+], 291306409040  [UniProt]  [KEGG]hypothetical protein
21SPAP_0879828528..828938 [+], 411306409041  [UniProt]  [KEGG]hypothetical protein
22SPAP_0880828829..831252 [+], 2424306409042  [UniProt]  [KEGG]Type IV secretory pathway, VirB4 component
23SPAP_0881831260..833839 [+], 2580306409043  [UniProt]  [KEGG]Cell wall-associated hydrolases (invasion-associated proteins)VF
24SPAP_0882833854..834093 [+], 240306409044  [UniProt]  [KEGG]hypothetical protein
25SPAP_0883834080..835663 [+], 1584306409045  [UniProt]  [KEGG]hypothetical protein
26SPAP_0884835678..836544 [+], 867306409046  [UniProt]  [KEGG]hypothetical protein
27SPAP_0885836656..837231 [+], 576306409047  [UniProt]  [KEGG]hypothetical protein
28SPAP_0886837224..838207 [+], 984306409048  [UniProt]  [KEGG]hypothetical protein
29SPAP_0887838300..840021 [+], 1722306409049  [UniProt]  [KEGG]Topoisomerase IA
30SPAP_0888840014..840979 [+], 966306409050  [UniProt]  [KEGG]Site-specific DNA methylase
31SPAP_0889840966..847262 [+], 6297306409051  [UniProt]  [KEGG]DNA methylase
32SPAP_0890847818..849353 [+], 1536306409052  [UniProt]  [KEGG]Retron-type reverse transcriptase
33SPAP_0891850994..851650 [+], 657306409053  [UniProt]  [KEGG]hypothetical protein
34SPAP_0892852209..852835 [+], 627306409054  [UniProt]  [KEGG]Transcriptional regulatorVF
35SPAP_0893852920..853801 [+], 882306409055  [UniProt]  [KEGG]ABC-type multidrug transport system, ATPase component
36SPAP_0894853734..855440 [+], 1707306409056  [UniProt]  [KEGG]tetronasin resistance transmembrane protein
37SPAP_0895856021..856227 [-], 207306409057  [UniProt]  [KEGG]hypothetical protein
38erm(TR)856174..856905 [+], 732306409058  [UniProt]  [KEGG]Dimethyladenosine transferase (rRNA methylation)AR
39SPAP_0897857122..857646 [+], 525306409059  [UniProt]  [KEGG]hypothetical protein
40SPAP_0898858667..859092 [+], 426306409060  [UniProt]  [KEGG]hypothetical protein
41SPAP_0899859297..859650 [+], 354306409061  [UniProt]  [KEGG]hypothetical protein
42SPAP_0900860132..861472 [-], 1341306409062  [UniProt]  [KEGG]Type IV secretory pathway, VirD2 components (relaxase)
43SPAP_0901861465..861821 [-], 357306409063  [UniProt]  [KEGG]hypothetical protein
44SPAP_0902862000..862335 [-], 336306409064  [UniProt]  [KEGG]hypothetical protein
45SPAP_0903862328..862561 [-], 234306409065  [UniProt]  [KEGG]hypothetical protein
46SPAP_0904862668..863150 [-], 483306409066  [UniProt]  [KEGG]hypothetical protein
47SPAP_0905863159..863707 [-], 549306409067  [UniProt]  [KEGG]Predicted Zn peptidaseTA
48SPAP_0906863716..864117 [-], 402306409068  [UniProt]  [KEGG]hypothetical proteinTA
49SPAP_0907864267..864827 [+], 561306409069  [UniProt]  [KEGG]hypothetical protein
50SPAP_0908865097..865507 [+], 411306409070  [UniProt]  [KEGG]hypothetical protein
51SPAP_0909865984..866205 [+], 222306409071  [UniProt]  [KEGG]hypothetical protein
52SPAP_0910866306..867976 [+], 1671306409072  [UniProt]  [KEGG]site-specific recombinase
53SPAP_0911867976..869646 [+], 1671306409073  [UniProt]  [KEGG]site-specific recombinase
54SPAP_0912869639..871132 [+], 1494306409074 site-specific recombinase
55SPAP_0913871308..872099 [+], 792306409075 Type I restriction-modification system methyltransferase subunit
56SPAP_0914872112..872654 [+], 543306409076 Restriction endonuclease S subunit
57SPAP_0915872651..873238 [+], 588306409077 Restriction endonuclease S subunit
58SPAP_0916873298..873534 [+], 237306409078 hypothetical protein
59SPAP_0917873531..873944 [+], 414306409079 Prophage maintenance system killer protein
60SPAP_0918874062..875027 [+], 966306409080 Integrase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins48Fasta
(1) Camilli R; Del Grosso M; Iannelli F; Pantosti A (2008). New genetic element carrying the erythromycin resistance determinant erm(TR) in Streptococcus pneumoniae. Antimicrob Agents Chemother. 52(2):619-25. [PudMed:18070957]