ICEberg
ICEberg ID421
NameICEM
FamilyICEM
OrganismMycoplasma mycoides subsp. capri str. GM12 transgenic clone tetM-lacZ
Size (bp)30217
GC content [Genome] (%)24 [24]
Insertion siteMMCAP1_0551
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP001621 (complete ICE sequence in this genome)
Replicon[CP001621]
Genome coordinates661768..691894
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEM form CP001621
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1MMCAP1_0551659495..661999 [+], 2505256385019 putative liporotein
2MMCAP1_0552662316..663104 [+], 789256384681  [UniProt] conserved hypothetical integrative conjugal element protein
3MMCAP1_0553663373..664614 [+], 1242256384754  [UniProt] conserved hypothetical integrative conjugal element protein
4MMCAP1_0554664787..665620 [+], 834256384739  [UniProt] C-5 cytosine-specific DNA methylase
5MMCAP1_0555665649..667664 [+], 2016256384799  [UniProt] membrane protein, putative (TraD/TraG family)
6MMCAP1_0556667680..668636 [+], 957256384489  [UniProt] conserved hypothetical integrative conjugal element protein
7MMCAP1_0557668620..669537 [+], 918256384600  [UniProt] conserved hypothetical integrative conjugal element protein
8MMCAP1_0558669552..669968 [+], 417256385205  [UniProt] single-strand binding family protein
9MMCAP1_0559670233..671423 [+], 1191256385293  [UniProt] conserved hypothetical integrative conjugal element protein
10MMCAP1_0560671661..673193 [+], 1533256384875  [UniProt] putative liporotein
11MMCAP1_0561673195..673386 [+], 192256385018  [UniProt] conserved hypothetical integrative conjugal element protein
12MMCAP1_0562673483..673713 [+], 231256385215  [UniProt] conserved hypothetical integrative conjugal element protein
13MMCAP1_0563673741..676464 [+], 2724256384883  [UniProt] putative membrane protein
14MMCAP1_0564676571..676756 [+], 186256385005  [UniProt] conserved hypothetical integrative conjugal element protein
15MMCAP1_0565676846..677223 [+], 378256385041  [UniProt] conserved hypothetical integrative conjugal element protein
16MMCAP1_0567679177..682020 [+], 2844256384515  [UniProt] putative membrane protein
17MMCAP1_0568682033..682698 [+], 666256384598  [UniProt] conserved hypothetical integrative conjugal element protein
18MMCAP1_0569682745..687712 [+], 4968256384585  [UniProt] putative membrane protein
19MMCAP1_0570688168..688914 [+], 747256385204  [UniProt] conserved hypothetical integrative conjugal element protein
20MMCAP1_0571689110..689475 [+], 366256385279  [UniProt] conserved hypothetical integrative conjugal element protein
21MMCAP1_0572689699..690613 [+], 915256384971  [UniProt] CobQ/CobB/MinD/ParA nucleotide binding domain, putative
22MMCAP1_0573690663..691895 [+], 1233256384998 conserved hypothetical integrative conjugal element protein
23MMCAP1_0574692482..695022 [+], 2541256384962 putative liporotein
24atpD_1695078..696457 [-], 1380256385107 ATP synthase F1, beta subunit
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
Identified as part of this study from CP001621