ICEberg
ICEberg
ICEberg ID425
NameICESpsED99-1
FamilyTn5801
OrganismStaphylococcus pseudintermedius ED99
Size (bp)25620
GC content [Genome] (%)35.4 [38]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002478 (complete ICE sequence in this genome)
Replicon[CP002478]
Genome coordinates2485813..2511432
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICESpsED99-1 form CP002478
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SPSE_24092482120..2482539 [-], 420323465469 conserved hypothetical protein
2SPSE_24102482896..2483093 [-], 198323465470 conserved hypothetical protein
3SPSE_24112483333..2483593 [-], 261323465471 hypothetical protein
4SPSE_24152486071..2487261 [+], 1191323465472  [UniProt] transposase, IS256 family
5SPSE_24162487395..2489584 [+], 2190323465473  [UniProt] conserved hypothetical protein
6SPSE_24172489581..2491374 [+], 1794323465474  [UniProt] conserved hypothetical proteinTA
7SPSE_24182491574..2491888 [+], 315323465475  [UniProt] conserved hypothetical protein
8SPSE_24192491909..2492286 [+], 378323465476  [UniProt] conserved hypothetical protein
9SPSE_24202492296..2493069 [+], 774323465477  [UniProt] conserved hypothetical protein
10SPSE_24212493091..2494494 [+], 1404323465478  [UniProt] conserved hypothetical protein
11SPSE_24222494676..2495860 [+], 1185323465479  [UniProt] transcriptional regulator, Cro/CI familyTA
12SPSE_24232496144..2496365 [+], 222323465480  [UniProt] conserved hypothetical protein
13SPSE_24242496407..2497186 [+], 780323465481  [UniProt] conserved hypothetical protein
14SPSE_24252497247..2497747 [+], 501323465482  [UniProt] conserved hypothetical protein
15SPSE_24262497803..2498441 [+], 639323465483  [UniProt] conserved hypothetical protein
16SPSE_24272498513..2498908 [+], 396323465484  [UniProt] conserved hypothetical protein
17SPSE_24282498892..2501345 [+], 2454323465485  [UniProt] conserved hypothetical protein
18SPSE_24292501342..2503369 [+], 2028323465486  [UniProt] conserved hypothetical protein
19SPSE_24302503366..2504388 [+], 1023323465487  [UniProt] lipoprotein, NLP/P60 familyVF
20SPSE_24312504405..2505334 [+], 930323465488  [UniProt] conserved hypothetical protein
21SPSE_24322505711..2507630 [+], 1920323465489  [UniProt] tetracycline resistance protein tetMAR
22SPSE_24332507974..2508327 [-], 354323465490  [UniProt] transcriptional regulator, putative
23SPSE_24342508858..2509280 [+], 423323465491  [UniProt] conserved hypothetical protein
24SPSE_24352509277..2509507 [+], 231323465492  [UniProt] conserved hypothetical protein
25SPSE_24362510005..2510205 [+], 201323465493  [UniProt] conserved hypothetical protein
26SPSE_24372510232..2511425 [+], 1194323465494  [UniProt] integrase
27guaA2511493..2513034 [-], 1542323465495 GMP synthase
28guaB2513057..2514523 [-], 1467323465496 inosine-5'-monophosphate dehydrogenase
29pbuX2514561..2515829 [-], 1269323465497 xanthine permease
30xpt2515826..2516410 [-], 585323465498 xanthine phosphoribosyltransferase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins23Fasta
Identified as part of this study from CP002478