ICEberg
ICEberg ID428
NameICESauJKD6008-2
FamilyTn5801
OrganismStaphylococcus aureus subsp. aureus str. JKD6008
Size (bp)28014
GC content [Genome] (%)35.8 [33]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002120 (complete ICE sequence in this genome)
Replicon[CP002120]
Genome coordinates426893..454906
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICESauJKD6008-2 form CP002120
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1xprT421916..422494 [+], 579302750279 putative xanthine phosphoribosyltransferase
2pbuX422494..423762 [+], 1269302750280 NCS2 family nucleobase:cation symporter-2
3guaB423800..425266 [+], 1467302750281 putative inosine-5'-monophosphate dehydrogenase
4guaA425291..426832 [+], 1542302750282 bifunctional GMP synthase/glutamine amidotransferase protein
5SAA6008_00391426900..428093 [-], 1194302750283  [UniProt] integrase-like protein
6SAA6008_00392429045..429527 [-], 483302750284  [UniProt] Sigma-70 Region 4 protein
7SAA6008_00393429998..430351 [+], 354302750285  [UniProt] putative transcriptional regulator
8tetM430695..432629 [-], 1935302750286  [UniProt] tetracycline resistance protein TetMAR
9SAA6008_00395432991..433953 [-], 963302750287  [UniProt] conserved hypothetical protein
10SAA6008_00396433937..434929 [-], 993302750288  [UniProt] conserved hypothetical proteinVF
11SAA6008_00397434956..436983 [-], 2028302750289  [UniProt] conserved hypothetical protein
12SAA6008_00398436980..439433 [-], 2454302750290  [UniProt] putative ATP/GTP-binding protein
13SAA6008_00399439417..439812 [-], 396302750291  [UniProt] conserved hypothetical protein
14SAA6008_00400439884..440513 [-], 630302750292  [UniProt] conserved hypothetical protein
15SAA6008_00401440542..441270 [-], 729302750293  [UniProt] Transposase-associated ATP/GTP binding proteinVF
16SAA6008_00402441270..442697 [-], 1428302750294  [UniProt] putative transposase
17ardA442965..443465 [-], 501302750295  [UniProt] putative antirestriction protein
18SAA6008_00405443526..444287 [-], 762302750296  [UniProt] conserved hypothetical protein
19SAA6008_00406444347..444517 [-], 171302750297  [UniProt] conserved hypothetical protein
20SAA6008_00407444852..446036 [-], 1185302750298  [UniProt] replication initiation factorTA
21SAA6008_00409446218..447621 [-], 1404302750299  [UniProt] DNA segregation ATPase FtsK/SpoIIIE
22SAA6008_00410447643..448416 [-], 774302750300  [UniProt] conserved hypothetical protein
23SAA6008_00411448426..448803 [-], 378302750301  [UniProt] conserved hypothetical protein
24SAA6008_00412448824..449138 [-], 315302750302  [UniProt] conserved hypothetical protein
25uvrD449338..451131 [-], 1794302750303  [UniProt] UvrD/REP helicaseTA
26recF_1451128..453317 [-], 2190302750304  [UniProt] recombinational DNA repair ATPase, RecF_1
27SAA6008_00415453451..454302 [-], 852302750305  [UniProt] transposase
28SAA6008_00416455142..455678 [-], 537302750306 conserved hypothetical protein
29SAA6008_00417456071..456775 [-], 705302750307 PemK-like protein
30SAA6008_00419457707..457859 [-], 153302750308 conserved hypothetical protein
31SAA6008_00420458383..458742 [-], 360302750309 conserved hypothetical protein
32SAA6008_00421458761..459606 [-], 846302750310 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins23Fasta
Identified as part of this study from CP002120