ICEberg
ICEberg ID43
NameR391
FamilySXT/R391
OrganismProvidencia rettgeri unknown strain(S)
Size (bp)88532
GC content [Genome] (%)46
Insertion siteprfC
FunctionKanamycin and mercury resistance
Species that ICE can be transferred toEscherichia coli; Bacteroides spp.
Nucleotide SequenceAY090559 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..88532
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
 

The gene information of R391 is not available.
ElementNo. of sequencesDownload
Nucleotide sequencesFasta
ProteinsFasta
(1) Wozniak RA; Fouts DE; Spagnoletti M; Colombo MM; Ceccarelli D; Garriss G; Dery C; Burrus V; Waldor MK (2009). Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs. PLoS Genet. 5(12):e1000786. [PudMed:20041216] in_silico
(2) Garriss G; Waldor MK; Burrus V (2009). Mobile antibiotic resistance encoding elements promote their own diversity. PLoS Genet. 5(12):e1000775. [PudMed:20019796] experimental
(3) Bordeleau E; Brouillette E; Robichaud N; Burrus V (2010). Beyond antibiotic resistance: integrating conjugative elements of the SXT/R391 family that encode novel diguanylate cyclases participate to c-di-GMP signalling in Vibrio cholerae. Environ Microbiol. 12(2):510-23. [PudMed:19888998] experimental
(4) Ceccarelli D; Daccord A; Rene M; Burrus V (2008). Identification of the origin of transfer (oriT) and a new gene required for mobilization of the SXT/R391 family of integrating conjugative elements. J Bacteriol. 190(15):5328-38. [PudMed:18539733] experimental
(5) Taviani E; Ceccarelli D; Lazaro N; Bani S; Cappuccinelli P; Colwell RR; Colombo MM (2008). Environmental Vibrio spp., isolated in Mozambique, contain a polymorphic group of integrative conjugative elements and class 1 integrons. FEMS Microbiol Ecol. 64(1):45-54. [PudMed:18318712] experimental
(6) Marrero J; Waldor MK (2007). Determinants of entry exclusion within Eex and TraG are cytoplasmic. J Bacteriol. 189(17):6469-73. [PudMed:17573467] experimental
(7) O'Halloran JA; McGrath BM; Pembroke JT (2007). The orf4 gene of the enterobacterial ICE, R391, encodes a novel UV-inducible recombination directionality factor, Jef, involved in excision and transfer of the ICE. FEMS Microbiol Lett. 272(1):99-105. [PudMed:17504243] experimental
(8) Marrero J; Waldor MK (2007). The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol. 189(8):3302-5. [PudMed:17307849] experimental
(9) Mead S; Vaisman A; Valjavec-Gratian M; Karata K; Vandewiele D; Woodgate R (2007). Characterization of polVR391: a Y-family polymerase encoded by rumA'B from the IncJ conjugative transposon, R391. Mol Microbiol. 63(3):797-810. [PudMed:17302804] experimental
(10) Marrero J; Waldor MK (2005). Interactions between inner membrane proteins in donor and recipient cells limit conjugal DNA transfer. Dev Cell. 8(6):963-70. [PudMed:15935784] experimental
(11) McGrath BM; O'Halloran JA; Pembroke JT (2005). Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. FEMS Microbiol Lett. 243(2):461-5. [PudMed:15686850] experimental
(12) McGrath BM; Pembroke JT (2004). Detailed analysis of the insertion site of the mobile elements R997, pMERPH, R392, R705 and R391 in E. coli K12. FEMS Microbiol Lett. 237(1):19-26. [PudMed:15268933] experimental
(13) Sabater-Munoz B; van Ham RC; Moya A; Silva FJ; Latorre A (2004). Evolution of the leucine gene cluster in Buchnera aphidicola: insights from chromosomal versions of the cluster. J Bacteriol. 186(9):2646-54. [PudMed:15090505] experimental
(14) Boltner D; Osborn AM (2004). Structural comparison of the integrative and conjugative elements R391, pMERPH, R997, and SXT. Plasmid. 51(1):12-23. [PudMed:14711525] experimental
(15) Boltner D; MacMahon C; Pembroke JT; Strike P; Osborn AM (2002). R391: a conjugative integrating mosaic comprised of phage, plasmid, and transposon elements. J Bacteriol. 184(18):5158-69. [PudMed:12193633] experimental
(16) Hochhut B; Beaber JW; Woodgate R; Waldor MK (2001). Formation of chromosomal tandem arrays of the SXT element and R391, two conjugative chromosomally integrating elements that share an attachment site. J Bacteriol. 183(4):1124-32. [PudMed:11157923] experimental
(17) Murphy DB; Pembroke JT (1999). Monitoring of chromosomal insertions of the IncJ elements R391 and R997 in Escherichia coli K-12. FEMS Microbiol Lett. 174(2):355-61. [PudMed:10339829] experimental
(18) Murphy DB; Pembroke JT (1995). Transfer of the IncJ plasmid R391 to recombination deficient Escherichia coli K12: evidence that R391 behaves as a conjugal transposon. FEMS Microbiol Lett. 134(2-3):153-8. [PudMed:8586262] experimental
(19) Peters SE; Hobman JL; Strike P; Ritchie DA (1991). Novel mercury resistance determinants carried by IncJ plasmids pMERPH and R391. Mol Gen Genet. 228(1-2):294-9. [PudMed:1886614] experimental
 
experimental experimental literature
in_silico in silico analysis literature