ICEberg
ICEberg ID433
NameICESpnR6-1
FamilyPPI-1
OrganismStreptococcus pneumoniae R6
Size (bp)36386
GC content [Genome] (%)31.5 [39]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAE007317 (complete ICE sequence in this genome)
Replicon chromosome (2038615 bp, Project:278) [NC_003098]
Genome coordinates919089..955474
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESpnR6-1 form AE007317
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1spr0929914516..915523 [+], 100815458537 Hypothetical protein
2spr0930915523..916137 [+], 61515458538 Conserved hypothetical protein
3spr0931916211..917185 [+], 97515458540 Conserved hypothetical protein
4spr0932917259..918890 [+], 163215458541 Conserved hypothetical protein
5spr0933919628..919846 [+], 21915458542  [UniProt]  [KEGG]Hypothetical protein
6ABC-SBP920239..921264 [+], 102615458543  [UniProt]  [KEGG]ABC transporter substrate-binding protein - iron transport
7ABC-MSP921242..922261 [+], 102015458544  [UniProt]  [KEGG]ABC transporter membrane-spanning permease - iron transport
8ABC-MSP922261..923268 [+], 100815458545  [UniProt]  [KEGG]ABC transporter membrane-spanning permease - iron transport
9spr0937922743..923156 [-], 41415458546  [UniProt]  [KEGG]Hypothetical protein
10ABC-NBD923268..924062 [+], 79515458547  [UniProt]  [KEGG]ABC transporter ATP-binding protein - iron transportVF
11spr0939924630..924839 [+], 21015458548  [UniProt]  [KEGG]Hypothetical protein
12spr0940924964..925119 [+], 15615458549  [UniProt]  [KEGG]Hypothetical protein
13spr0941925803..925964 [+], 16215458550  [UniProt]  [KEGG]Hypothetical protein
14ccrB926056..927735 [+], 168015458551  [UniProt]  [KEGG]Low similarity to site-specific recombinase
15spr0943927958..928569 [+], 61215458553  [UniProt]  [KEGG]Hypothetical protein
16spr0944928882..929079 [+], 19815458554  [UniProt]  [KEGG]Hypothetical protein
17spr0945929141..929956 [+], 81615458555  [UniProt]  [KEGG]Hypothetical protein
18spr0946929956..930810 [+], 85515458556  [UniProt]  [KEGG]Conserved hypothetical protein
19spr0947930871..931806 [+], 93615458557  [UniProt]  [KEGG]Conserved hypothetical protein
20nplT931945..933708 [+], 176415458558  [UniProt]  [KEGG]Neopullulanase
21spr0949933794..934111 [+], 31815458559  [UniProt]  [KEGG]Hypothetical protein
22spr0950934157..934438 [+], 28215458560  [UniProt]  [KEGG]Hypothetical protein
23spr0951934826..935359 [+], 53415458561  [UniProt]  [KEGG]Hypothetical proteinTA
24spr0952935359..936120 [+], 76215458562  [UniProt]  [KEGG]Conserved hypothetical proteinTA
25spr0953936148..936924 [+], 77715458563  [UniProt]  [KEGG]Hypothetical protein
26spr0954936852..937304 [+], 45315458564  [UniProt]  [KEGG]Hypothetical protein
27spr0955938136..938495 [+], 36015458566  [UniProt]  [KEGG]Hypothetical protein
28spr0956938505..938834 [+], 33015458567  [UniProt]  [KEGG]Hypothetical protein
29spr0957938857..939474 [+], 61815458568  [UniProt]  [KEGG]Tn5252, relaxase, truncation
30spr0958939505..940062 [+], 55815458569  [UniProt]  [KEGG]Tn5252, relaxase, truncation
31spr0959940146..940742 [+], 59715458570  [UniProt]  [KEGG]Hypothetical protein
32mutR940787..941641 [-], 85515458571  [UniProt]  [KEGG]Similar to positive transcriptional regulator MutR
33rffD941893..943188 [+], 129615458573  [UniProt]  [KEGG]UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
34spr0962943148..943798 [+], 65115458574  [UniProt]  [KEGG]Conserved hypothetical protein
35spr0963943808..944590 [+], 78315458575  [UniProt]  [KEGG]Hypothetical protein
36spr0964944613..946505 [+], 189315458576  [UniProt]  [KEGG]Hypothetical protein
37spr0965946534..947640 [+], 110715458577  [UniProt]  [KEGG]Hypothetical protein
38spr0966947648..948958 [+], 131115458578  [UniProt]  [KEGG]Conserved hypothetical protein
39spr0967948960..950183 [+], 122415458579  [UniProt]  [KEGG]Conserved hypothetical protein
40spr0968950173..951123 [+], 95115458580  [UniProt]  [KEGG]Hypothetical protein
41nikS951138..952337 [+], 120015458581  [UniProt]  [KEGG]Nikkomycin biosynthesis protein, carboxylase
42spr0970952356..953000 [+], 64515458582  [UniProt]  [KEGG]Conserved hypothetical protein
43mefE953383..954594 [+], 121215458584  [UniProt]  [KEGG]ABC transporter membrane-spanning permease - macrolide efflux
44spr0972955253..955474 [+], 22215458585  [UniProt]  [KEGG]Conserved hypothetical protein
45ftsW956376..957605 [+], 123015458586 Cell division protein FtsW
46ppc957625..960321 [+], 269715458587 Phosphoenolpyruvate carboxylase
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins40Fasta
(1) Croucher NJ; Walker D; Romero P; Lennard N; Paterson GK; Bason NC; Mitchell AM; Quail MA; Andrew PW; Parkhill J; Bentley SD; Mitchell TJ (2009). Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81. J Bacteriol. 191(5):1480-9. [PudMed:19114491]