ICEberg
ICEberg ID434
NameICESpnTIGR4-1
FamilyPPI-1
OrganismStreptococcus pneumoniae TIGR4
Size (bp)28119
GC content [Genome] (%)33 [39]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAE005672 (complete ICE sequence in this genome)
Replicon chromosome (2160842 bp, Project:277) [NC_003028]
Genome coordinates972255..1000373
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESpnTIGR4-1 form AE005672
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SP_1025967682..968689 [+], 100814972498 hypothetical protein
2SP_1026968689..969303 [+], 61514972499 conserved hypothetical protein
3SP_1027969377..970351 [+], 97514972500 conserved hypothetical protein
4SP_1028970320..970412 [+], 9314972501 hypothetical protein
5SP_1029970425..972056 [+], 163214972502 RNA methyltransferase, TrmA family
6SP_1030972795..973013 [+], 21914972504  [UniProt]  [KEGG]conserved hypothetical protein
7SP_1031973184..973285 [+], 10214972505  [UniProt]  [KEGG]hypothetical protein
8SP_1032973406..974431 [+], 102614972506  [UniProt]  [KEGG]iron-compound ABC transporter, iron compound-binding protein
9SP_1033974409..975428 [+], 102014972507  [UniProt]  [KEGG]iron-compound ABC transporter, permease protein
10SP_1034975428..976435 [+], 100814972508  [UniProt]  [KEGG]iron-compound ABC transporter, permease protein
11SP_1035976435..977229 [+], 79514972509  [UniProt]  [KEGG]iron-compound ABC transporter, ATP-binding proteinVF
12SP_1036977345..977437 [-], 9314972510  [UniProt]  [KEGG]hypothetical protein
13SP_1037977797..978006 [+], 21014972511  [UniProt]  [KEGG]putative type II restriction endonuclease
14SP_1038978131..978286 [+], 15614972512  [UniProt]  [KEGG]hypothetical protein
15SP_1039978970..979131 [+], 16214972513  [UniProt]  [KEGG]hypothetical protein
16SP_1040979223..980902 [+], 168014972514  [UniProt]  [KEGG]site-specific recombinase, resolvase family
17SP_1041981125..981736 [+], 61214972515  [UniProt]  [KEGG]hypothetical protein
18SP_1042982049..982246 [+], 19814972516  [UniProt]  [KEGG]hypothetical protein
19SP_1043982308..983066 [+], 75914972517  [UniProt]  [KEGG]hypothetical protein
20SP_1044983124..983978 [+], 85514972518  [UniProt]  [KEGG]putative hydrolase
21SP_1045984090..984974 [+], 88514972520  [UniProt]  [KEGG]conserved hypothetical protein TIGR00147
22SP_1047986963..987280 [+], 31814972521  [UniProt]  [KEGG]hypothetical protein
23SP_1048987326..987607 [+], 28214972522  [UniProt]  [KEGG]hypothetical protein
24SP_1049987747..987860 [+], 11414972523  [UniProt]  [KEGG]hypothetical protein
25SP_1050988052..988528 [+], 47714972524  [UniProt]  [PDB]  [KEGG]putative transcriptional regulatorTA
26SP_1051988528..989289 [+], 76214972525  [UniProt]  [PDB]  [KEGG]conserved hypothetical proteinTA
27SP_1052989317..990093 [+], 77714972526  [UniProt]  [KEGG]putative phosphoesterase
28SP_1053990096..990473 [+], 37814972527  [UniProt]  [KEGG]conserved domain protein
29SP_1054991304..991660 [+], 35714972528  [UniProt]  [KEGG]Tn5252, Orf 10 protein
30SP_1055991665..992030 [+], 36614972529  [UniProt]  [KEGG]Tn5252, Orf 9 protein
31SP_1056992017..993840 [+], 182414972530  [UniProt]  [KEGG]Tn5252, relaxase
32SP_1057993954..994820 [+], 86714972531  [UniProt]  [KEGG]putative transcriptional regulator PlcR
33SP_1058994973..995107 [+], 13514972533  [UniProt]  [KEGG]hypothetical protein
34SP_1059995411..995662 [+], 25214972534  [UniProt]  [KEGG]hypothetical protein
35SP_1060995882..996193 [+], 31214972535  [UniProt]  [KEGG]hypothetical protein
36SP_1061996190..997536 [+], 134714972536  [UniProt]  [KEGG]putative protein kinase
37SP_1062997550..998467 [+], 91814972537  [UniProt]  [KEGG]ABC transporter, ATP-binding protein
38SP_1063998464..999264 [+], 80114972538  [UniProt]  [KEGG]putative ABC-2 transporter, permease protein
39SP_1064999422..999895 [+], 47414972539  [UniProt]  [KEGG]transposase, IS200 family
40SP_10651000385..1000606 [-], 22214972540 hypothetical protein
41SP_10671001278..1002507 [+], 123014972541 putative cell division protein FtsW
42ppc1002527..1005223 [+], 269714972542 phosphoenolpyruvate carboxylase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins34Fasta
(1) Croucher NJ; Walker D; Romero P; Lennard N; Paterson GK; Bason NC; Mitchell AM; Quail MA; Andrew PW; Parkhill J; Bentley SD; Mitchell TJ (2009). Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81. J Bacteriol. 191(5):1480-9. [PudMed:19114491]