ICEberg
ICEberg ID48
NameICEBxeLB400-1
FamilyICEclc
OrganismBurkholderia xenovorans LB400
Size (bp)122833
GC content [Genome] (%)62 [63]
Insertion sitetRNA-Gly(Bxe_AR0057)
FunctionDrug resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP000270 (complete ICE sequence in this genome)
Replicon chromosome 1 (4895836 bp, Project:254) [NC_007951]
Genome coordinates3559420..3682252
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEBxeLB400-1 form CP000270
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1Bxe_A12353555320..3556054 [-], 73591688518 hypothetical protein
2Bxe_A12343556532..3557410 [-], 87991688519 hypothetical protein
3Bxe_A12333557414..3558730 [-], 131791688520 hypothetical protein
4Bxe_A12323560225..3560980 [+], 75691688521  [UniProt]  [KEGG]Conserved hypothetical protein
5Bxe_A12313561100..3561312 [+], 21391688522  [UniProt]  [KEGG]phage transcriptional regulator, AlpAVF
6Bxe_A12303561356..3562231 [+], 87691688523  [UniProt]  [KEGG]Putative chromosome partitioning protein ParA
7Bxe_A12293562465..3564117 [+], 165391688524  [UniProt]  [KEGG]Conserved hypothetical protein
8Bxe_A12283564133..3564693 [+], 56191688525  [UniProt]  [KEGG]Conserved hypothetical protein
9Bxe_A12273564697..3565941 [+], 124591688526  [UniProt]  [KEGG]Conserved hypothetical protein
10Bxe_A12263566272..3567051 [+], 78091688527  [UniProt]  [KEGG]Conserved hypothetical protein
11Bxe_A12253567048..3567575 [+], 52891688528  [UniProt]  [KEGG]Putative integrase regulator R protein
12Bxe_A12243567649..3568089 [+], 44191688529  [UniProt]  [KEGG]Putative single-stranded DNA binding protein
13Bxe_A12233568368..3570380 [+], 201391688530  [UniProt]  [KEGG]DNA topoisomerase III
14Bxe_A12223570917..3572518 [+], 160291688531  [UniProt]  [KEGG]C-5 cytosine-specific DNA methylase
15Bxe_A12213572763..3573320 [+], 55891688532  [UniProt]  [KEGG]Conserved hypothetical protein
16Bxe_A12203573477..3573863 [+], 38791688533  [UniProt]  [KEGG]Conserved hypothetical protein
17Bxe_A12193573885..3574277 [+], 39391688534  [UniProt]  [KEGG]Conserved hypothetical protein
18Bxe_A12183574450..3575136 [+], 68791688535  [UniProt]  [KEGG]Conserved hypothetical protein
19Bxe_A12173575216..3575953 [+], 73891688536  [UniProt]  [KEGG]hypothetical protein
20Bxe_A12163576051..3576329 [+], 27991688537  [UniProt]  [KEGG]hypothetical protein
21Bxe_A12153576616..3577428 [+], 81391688538  [UniProt]  [KEGG]hypothetical protein
22Bxe_A12143577572..3577925 [+], 35491688539  [UniProt]  [KEGG]Conserved hypothetical protein
23Bxe_A12133578070..3578324 [+], 25591688540  [UniProt]  [KEGG]hypothetical protein
24Bxe_A12123578373..3579740 [+], 136891688541  [UniProt]  [KEGG]RNA-directed DNA polymerase (Reverse transcriptase)
25Bxe_A12113579925..3580767 [+], 84391688542  [UniProt]  [KEGG]Putative phage-related protein
26Bxe_A12103581086..3581469 [-], 38491688543  [UniProt]  [KEGG]hypothetical protein
27Bxe_A12093581545..3582462 [+], 91891688544  [UniProt]  [KEGG]Conserved hypothetical protein
28Bxe_A12083582520..3583209 [+], 69091688545  [UniProt]  [KEGG]Conserved hypothetical protein
29Bxe_A12073583305..3583637 [+], 33391688546  [UniProt]  [KEGG]Conserved hypothetical, plasmid-related protein
30Bxe_A12063583734..3584141 [+], 40891688547  [UniProt]  [KEGG]Conserved hypothetical protein
31Bxe_A12053584158..3584418 [+], 26191688548  [UniProt]  [KEGG]Conserved hypothetical protein
32Bxe_A12043584495..3585145 [+], 65191688549  [UniProt]  [KEGG]Conserved hypothetical protein
33Bxe_A12033585210..3586319 [+], 111091688550  [UniProt]  [KEGG]Conserved hypothetical, plasmid-related protein
34Bxe_A12023586392..3588698 [+], 230791688551  [UniProt]  [KEGG]Putative, plasmid-related, DNA/RNA helicase
35Bxe_A12013588812..3589681 [+], 87091688552  [UniProt]  [KEGG]hypothetical protein
36Bxe_A12003589842..3590441 [+], 60091688553  [UniProt]  [KEGG]Conserved hypothetical proteinVF
37Bxe_A11993590438..3591088 [+], 65191688554  [UniProt]  [KEGG]hypothetical protein
38Bxe_A11983591103..3591822 [+], 72091688555  [UniProt]  [KEGG]Conserved hypothetical protein
39Bxe_A11973591804..3592394 [+], 59191688556  [UniProt]  [KEGG]Conserved hypothetical protein
40Bxe_A11963592391..3592939 [+], 54991688557  [UniProt]  [KEGG]Conserved hypothetical protein
41Bxe_A11953592944..3595130 [+], 218791688558  [UniProt]  [KEGG]hypothetical protein
42Bxe_A11943595127..3595876 [+], 75091688559  [UniProt]  [KEGG]Conserved hypothetical protein
43Bxe_A11933595913..3596317 [-], 40591688560  [UniProt]  [KEGG]hypothetical protein
44Bxe_A11923596503..3596886 [+], 38491688561  [UniProt]  [KEGG]Plasmid conserved hypothetical protein, RAQPRD
45Bxe_A11913596883..3597116 [+], 23491688562  [UniProt]  [KEGG]hypothetical protein
46Bxe_A11903597127..3597492 [+], 36691688563  [UniProt]  [KEGG]Conserved hypothetical protein
47Bxe_A11893597505..3597915 [+], 41191688564  [UniProt]  [KEGG]Conserved hypothetical protein
48Bxe_A11883597912..3598604 [+], 69391688565  [UniProt]  [KEGG]Conserved hypothetical protein
49Bxe_A11873598601..3599533 [+], 93391688566  [UniProt]  [KEGG]Conserved hypothetical protein
50Bxe_A11863599523..3600941 [+], 141991688567  [UniProt]  [KEGG]Conserved hypothetical protein
51Bxe_A11853600922..3601362 [+], 44191688568  [UniProt]  [KEGG]Conserved hypothetical protein
52Bxe_A11843601362..3604229 [+], 286891688569  [UniProt]  [KEGG]Conserved hypothetical protein
53Bxe_A11833604243..3605007 [+], 76591688570  [UniProt]  [KEGG]Conserved hypothetical protein
54Bxe_A11823605191..3605685 [+], 49591688571  [UniProt]  [KEGG]DNA repair protein RadCVF
55Bxe_A11813605844..3606290 [+], 44791688572  [UniProt]  [KEGG]Conserved hypothetical protein
56Bxe_A11803606287..3607234 [+], 94891688573  [UniProt]  [KEGG]Conserved hypothetical protein
57Bxe_A11793607244..3608641 [+], 139891688574  [UniProt]  [KEGG]Conserved hypothetical protein
58Bxe_A11783608638..3608997 [+], 36091688575  [UniProt]  [KEGG]hypothetical protein
59Bxe_A11773609013..3610530 [+], 151891688576  [UniProt]  [KEGG]Conserved hypothetical protein
60Bxe_A11763610544..3610921 [-], 37891688577  [UniProt]  [KEGG]hypothetical protein
61Bxe_A11753610949..3611407 [-], 45991688578  [UniProt]  [KEGG]Conserved hypothetical proteinTA
62Bxe_A11743611407..3611793 [-], 38791688579  [UniProt]  [KEGG]transcriptional regulator, AbrB familyTA
63Bxe_A11733612030..3613877 [+], 184891688580  [UniProt]  [KEGG]Conserved hypothetical protein
64Bxe_A11713614392..3615198 [-], 80791688581  [UniProt]  [KEGG]transcriptional regulator, AraC family
65Bxe_A11703615261..3616487 [+], 122791688582  [UniProt]  [KEGG]major facilitator family (MFS) transporter
66Bxe_A11653617981..3618898 [-], 91891688583  [UniProt]  [KEGG]transcriptional regulator, AraC family
67Bxe_A11643619150..3620730 [+], 158191688584  [UniProt]  [KEGG]Putative AMP-dependent, long-chain-fatty-acid- CoA ligase
68Bxe_A11633620732..3622144 [+], 141391688585  [UniProt]  [KEGG]Putative long-chain-fatty-acid--CoA ligase
69Bxe_A11623622200..3623195 [+], 99691688586  [UniProt]  [KEGG]Nitrilase (NitA)
70Bxe_A11613623223..3624257 [+], 103591688587  [UniProt]  [KEGG]hypothetical protein
71Bxe_A11603624752..3625954 [-], 120391688588  [UniProt]  [KEGG]Putative esterase of the alpha-beta hydrolase superfamily
72Bxe_A11593625984..3626646 [-], 66391688589  [UniProt]  [KEGG]hypothetical protein
73Bxe_A11583626672..3626974 [-], 30391688590  [UniProt]  [KEGG]Conserved hypothetical protein
74Bxe_A11573627006..3628040 [-], 103591688591  [UniProt]  [KEGG]MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily
75Bxe_A11563628048..3629622 [-], 157591688592  [UniProt]  [KEGG]major facilitator superfamily (MFS) multidrug efflux pump
76Bxe_A11553629619..3631154 [-], 153691688593  [UniProt]  [KEGG]MFS efflux system, outer membrane porin
77Bxe_A11543631331..3631729 [-], 39991688594  [UniProt]  [KEGG]hypothetical protein
78Bxe_A11533631772..3632398 [-], 62791688595  [UniProt]  [KEGG]Putative esterase
79amnG3632776..3633813 [-], 103891688596  [UniProt]  [KEGG]4-hydroxy 2-oxovalerate aldolase
80amnH3633829..3634770 [-], 94291688597  [UniProt]  [KEGG]acetaldehyde dehydrogenase
81amnE3634831..3635595 [-], 76591688598  [UniProt]  [KEGG]4-oxalocrotonate decarboxylase
82amnF3635592..3636401 [-], 81091688599  [UniProt]  [KEGG]2-keto-4-pentenoate hydratase
83amnD3636416..3636853 [-], 43891688600  [UniProt]  [KEGG]2-aminomuconate deaminase
84amnC3636858..3638336 [-], 147991688601  [UniProt]  [KEGG]2-hydroxymuconate semialdehyde dehydrogenase
85amnA3638396..3639208 [-], 81391688602  [UniProt]  [KEGG]2-aminophenol 1,6-dioxygenase, alpha subunit
86amnB3639253..3640167 [-], 91591688603  [UniProt]  [KEGG]2-aminophenol 1,6-dioxygenase, beta subunit
87Bxe_A11443640179..3640592 [-], 41491688604  [UniProt]  [KEGG]Putative endoribonuclease, translationalinhibitor protein
88Bxe_A11433640688..3641305 [+], 61891688605  [UniProt]  [KEGG]transcriptional regulator, MarR family
89Bxe_A11423641444..3642196 [+], 75391688606  [UniProt]  [KEGG]Conserved hypothetical protein
90Bxe_A11413642218..3642877 [+], 66091688607  [UniProt]  [KEGG]transcriptional regulator, TetR family
91Bxe_A11403642990..3643409 [+], 42091688608  [UniProt]  [KEGG]Conserved hypothetical protein
92Bxe_A11393643600..3644499 [+], 90091688609  [UniProt]  [KEGG]Conserved hypothetical protein
93Bxe_A11383644930..3645616 [+], 68791688610  [UniProt]  [KEGG]transcriptional regulator, TetR family
94Bxe_A11373645613..3646137 [+], 52591688611  [UniProt]  [KEGG]transcriptional regulator, MarR family
95Bxe_A11363646159..3647070 [+], 91291688612  [UniProt]  [KEGG]transcriptional regulator, LysR familyVF
96Bxe_A11353647096..3647395 [-], 30091688613  [UniProt]  [KEGG]transcriptional regulator, XRE family
97Bxe_A11343647517..3648158 [+], 64291688614  [UniProt]  [KEGG]transcriptional regulator, LysR family
98clcR3649227..3650111 [-], 88591688615  [UniProt]  [KEGG]transcriptional regulator, LysR family
99clcA3650281..3651063 [+], 78391688616  [UniProt]  [KEGG]3-chlorocatechol 1,2-dioxygenase
100clcB3651060..3652172 [+], 111391688617  [UniProt]  [KEGG]muconate cycloisomerase
101Bxe_A11283652199..3653185 [+], 98791688618  [UniProt]  [KEGG]putative tricarboxylate transporter, periplasmic ligand binding protein (TctC subunit)
102clcD3653207..3653917 [+], 71191688619  [UniProt]  [KEGG]Dienelactone hydrolase
103clcE3653914..3654972 [+], 105991688620  [UniProt]  [KEGG]maleylacetate reductase
104Bxe_A11253655088..3656071 [+], 98491688621  [UniProt]  [KEGG]transcriptional regulator, AraC family
105Bxe_A11243656722..3658011 [-], 129091688622  [UniProt]  [KEGG]Transposase, TnpA
106Bxe_A11233658217..3658795 [+], 57991688623  [UniProt]  [KEGG]hypothetical protein
107Bxe_A11223658894..3660330 [+], 143791688624  [UniProt]  [KEGG]Putative transposase protein
108Bxe_A11213660327..3661184 [+], 85891688625  [UniProt]  [KEGG]Putative general secretion pathway protein, ATPase
109Bxe_A11203661186..3661401 [+], 21691688626  [UniProt]  [KEGG]hypothetical protein
110Bxe_A11193661451..3661972 [-], 52291688627  [UniProt]  [KEGG]signal peptidase II, Aspartic peptidase, MEROPS family A08
111Bxe_A11183661976..3662872 [-], 89791688628  [UniProt]  [KEGG]heavy metal efflux pump, CDF family
112Bxe_A11173662968..3663375 [+], 40891688629  [UniProt]  [KEGG]transcriptional regulator, MerR family
113Bxe_A11163663667..3664659 [+], 99391688630  [UniProt]  [KEGG]Putative ABC transporter, periplasmic ligand binding protein
114Bxe_A11153664896..3665798 [+], 90391688631  [UniProt]  [KEGG]Putative dehydrogenase/oxidoreductase protein
115Bxe_A11143665813..3666127 [+], 31591688632  [UniProt]  [KEGG]Conserved hypothetical protein
116Bxe_A11133666140..3667069 [+], 93091688633  [UniProt]  [KEGG]Putative dioxygenase
117Bxe_A11123667071..3667451 [+], 38191688634  [UniProt]  [KEGG]Conserved hypothetical protein
118Bxe_A11113667464..3668408 [+], 94591688635  [UniProt]  [KEGG]Putative fumarylacetoacetate (FAA) hydrolase
119Bxe_A11103668440..3668844 [+], 40591688636  [UniProt]  [KEGG]amino acid/amide ABC transporter substrate-binding protein, HAAT family
120ohbR3668806..3669132 [-], 32791688637  [UniProt]  [KEGG]transcriptional regulator, IclR family
121ohbA3669452..3669982 [+], 53191688638  [UniProt]  [KEGG]Ortho-halobenzoate-1,2-dioxygenase, beta subunit
122ohbB3670023..3671309 [+], 128791688639  [UniProt]  [KEGG]Ortho-halobenzoate 1,2-dioxygenase, alpha subunit
123Bxe_A11063671546..3672835 [-], 129091688640  [UniProt]  [KEGG]Transposase, TnpA
124Bxe_A11053672857..3673369 [-], 51391688641  [UniProt]  [KEGG]signal peptidase II, Aspartic peptidase, MEROPS family A08
125Bxe_A11043673373..3674269 [-], 89791688642  [UniProt]  [KEGG]heavy metal efflux pump, CDF family
126Bxe_A11033674365..3674772 [+], 40891688643  [UniProt]  [KEGG]transcriptional regulator, MerR family
127Bxe_A11023675071..3676333 [+], 126391688644  [UniProt]  [KEGG]ring hydroxylating dioxygenase, alpha subunit
128Bxe_A11013676336..3676815 [+], 48091688645  [UniProt]  [KEGG]Aromatic-ring-hydroxylating dioxygenase, beta subunit
129Bxe_A11003676913..3677890 [+], 97891688646  [UniProt]  [KEGG]Vanillate O-demethylase reductase subunit, VanB
130Bxe_A10993678095..3679480 [+], 138691688647  [UniProt]  [KEGG]Major facilitator superfamily, aromatic acid/H+ symporter
131Bxe_A10983679542..3679886 [+], 34591688648  [UniProt]  [KEGG]Conserved hypothetical protein
132Bxe_A10973680095..3682026 [-], 193291688649  [UniProt]  [KEGG]Putative phage integrase
133Bxe_A10963682541..3683167 [-], 62791688650 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
134Bxe_A10953683290..3685551 [-], 226291688651 Excinuclease ABC subunit C
135Bxe_A10943685757..3686950 [+], 119491688652 Conserved hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
regulation Gene may play role in regulation of transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins129Fasta
Identified as part of this study from CP000270