ICEberg
ICEberg ID52
NameICEPaeLESB58-1
FamilyICEclc
OrganismPseudomonas aeruginosa LESB58
Size (bp)111102
GC content [Genome] (%)64 [66]
Insertion sitetRNA-Gly(PLES_26042)
FunctionMercuric resistance
Species that ICE can be transferred to-
Nucleotide SequenceFM209186 (complete ICE sequence in this genome)
Replicon chromosome (6601757 bp, Project:31101) [NC_011770]
Genome coordinates2796710..2907811
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICEPaeLESB58-1 form FM209186
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1pqsH2792010..2793158 [+], 1149218771559 probable FAD-dependent monooxygenase
2gacA2793500..2794144 [+], 645218771560 response regulator GacA
3uvrC2794145..2795971 [+], 1827218771561 excinuclease ABC subunit C
4pgsA2796005..2796565 [+], 561218771562 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
5PLES_260512796936..2798879 [+], 1944218771563  [UniProt]  [KEGG]phage-related integrase
6PLES_260612798946..2799587 [-], 642218771564  [UniProt]  [KEGG]transcriptional regulator, LysR family
7PLES_260712800012..2800905 [-], 894218771565  [UniProt]  [KEGG]transcriptional regulator, LysR family
8PLES_260812801226..2801822 [-], 597pseudogene 4-hydroxyphenylpyruvate dioxygenase (pseudogene)
9PLES_260912801863..2802039 [+], 177pseudogene transcriptional regulator, AsnC family (pseudogene)
10PLES_261012802140..2802334 [+], 195218771566  [UniProt]  [KEGG]Heavy metal transport/detoxification protein
11PLES_261112802409..2802636 [-], 228pseudogene glutaredoxin (pseudogene)
12PLES_261212802873..2803145 [-], 273218771567  [UniProt]  [KEGG]glutaredoxin
13fdx2803369..2803707 [-], 339218771568  [UniProt]  [KEGG][2Fe-2S] ferredoxin
14PLES_261412803723..2804202 [-], 480218771569  [UniProt]  [KEGG]transcriptional regulator, MerR family
15PLES_261512804218..2806647 [-], 2430218771570  [UniProt]  [KEGG]hypothetical protein
16PLES_261612807081..2807305 [+], 225218771571  [UniProt]  [KEGG]hypothetical protein
17PLES_261712807415..2808572 [-], 1158218771572  [UniProt]  [KEGG]dihydrolipoamide dehydrogenase
18PLES_261812809400..2812546 [-], 3147218771573  [UniProt]  [KEGG]heavy metal efflux pump, CzcA family
19PLES_261912812560..2813459 [-], 900218771574  [UniProt]  [KEGG]hypothetical protein
20PLES_262012814258..2815349 [-], 1092pseudogene outer membrane efflux protein (pseudogene)
21PLES_262112815869..2816126 [+], 258218771575  [UniProt]  [KEGG]protein of unknown function DUF156
22PLES_262212816136..2817446 [+], 1311218771576  [UniProt]  [KEGG]putative nrbE-like protein
23efflux2817640..2818602 [+], 963218771577  [UniProt]  [KEGG]cation efflux family protein
24PLES_262412818646..2819023 [+], 378218771578  [UniProt]  [KEGG]transcriptional regulator, ArsR family
25PLES_262512819556..2819822 [+], 267218771579  [UniProt]  [KEGG]hypothetical protein
26PLES_262612819989..2822703 [+], 2715218771580  [UniProt]  [KEGG]heavy metal translocating P-type ATPase
27PLES_262712822815..2823417 [+], 603218771581  [UniProt]  [KEGG]efflux transporter, RND family, MFP subunit
28PLES_262812824136..2827312 [+], 3177218771582  [UniProt]  [KEGG]transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
29PLES_262912827333..2828838 [+], 1506218771583  [UniProt]  [KEGG]RND efflux system, outer membrane lipoprotein, NodT family
30PLES_263012829354..2830535 [+], 1182218771584  [UniProt]  [KEGG]major facilitator superfamily MFS_1
31PLES_263112830987..2831127 [+], 141218771585  [UniProt]  [KEGG]hypothetical protein
32PLES_263212831394..2832848 [+], 1455218771586  [UniProt]  [KEGG]mercuric reductase
33PLES_263312833295..2834071 [+], 777pseudogene major facilitator superfamily MFS_1 (pseudogene)
34PLES_263412834118..2834621 [-], 504218771587  [UniProt]  [KEGG]hypothetical protein
35PLES_263512834803..2835192 [-], 390218771588  [UniProt]  [KEGG]hypothetical protein
36PLES_263612835545..2836240 [+], 696218771589  [UniProt]  [KEGG]transcriptional regulator, GntR family
37PLES_263712836396..2836806 [-], 411218771590  [UniProt]  [KEGG]transcriptional regulator, GntR family
38PLES_263812836987..2837688 [+], 702218771591  [UniProt]  [KEGG]putative exported protein
39PLES_263912837699..2837956 [+], 258218771592  [UniProt]  [KEGG]glutaredoxin
40PLES_264012838131..2839003 [+], 873218771593  [UniProt]  [KEGG]2-dehydro-3-deoxyphosphooctonate aldolase
41PLES_264212839054..2840925 [-], 1872218771594  [UniProt]  [KEGG]Relaxase
42PLES_264312841242..2841868 [+], 627218771595  [UniProt]  [KEGG]hypothetical proteinTA
43PLES_264412841881..2842513 [+], 633218771596  [UniProt]  [KEGG]hypothetical proteinTA
44PLES_264512842598..2842963 [+], 366218771597  [UniProt]  [KEGG]conserved hypothetical protein
45PLES_264612842975..2844495 [-], 1521218771598  [UniProt]  [KEGG]STY4579
46PLES_264712844511..2844882 [-], 372218771599  [UniProt]  [KEGG]hypothetical protein
47PLES_264812844879..2846276 [-], 1398218771600  [UniProt]  [KEGG]conserved hpothetical protein
48PLES_264912846286..2847233 [-], 948218771601  [UniProt]  [KEGG]conserved hypothetical protein
49PLES_265012847230..2847622 [-], 393218771602  [UniProt]  [KEGG]hypothetical protein
50PLES_265112847839..2848333 [-], 495218771603  [UniProt]  [KEGG]RadC family DNA repair proteinVF
51PLES_265212848516..2849301 [-], 786218771604  [UniProt]  [KEGG]conserved hypothetical protein
52PLES_265312849315..2852200 [-], 2886218771605  [UniProt]  [KEGG]conserved hypothetical protein
53PLES_265412852621..2854039 [-], 1419218771606  [UniProt]  [KEGG]conserved hypothetical protein
54PLES_265512854937..2855629 [-], 693218771607  [UniProt]  [KEGG]conserved hypothetical protein
55PLES_265612855626..2855958 [-], 333218771608  [UniProt]  [KEGG]hypothetical protein
56PLES_265712856049..2856408 [-], 360218771609  [UniProt]  [KEGG]conserved hypothetical protein
57PLES_265812856425..2856658 [-], 234218771610  [UniProt]  [KEGG]hypothetical protein
58PLES_265912856655..2857038 [-], 384218771611  [UniProt]  [KEGG]plasmid Ignore, RAQPRD family
59PLES_266012857242..2857712 [+], 471218771612  [UniProt]  [KEGG]DNA binding domain, excisionase familyTA
60PLES_266112857709..2858284 [+], 576218771613  [UniProt]  [KEGG]conserved hypothetical proteinTA
61PLES_266212858302..2859216 [+], 915218771614  [UniProt]  [KEGG]AAA ATPase, central domain protein
62PLES_266312859680..2860180 [+], 501218771615  [UniProt]  [KEGG]hypothetical protein
63PLES_266412860180..2861082 [+], 903218771616  [UniProt]  [KEGG]hypothetical protein
64PLES_266512861121..2861846 [+], 726218771617  [UniProt]  [KEGG]hypothetical protein
65PLES_266612861898..2864480 [+], 2583218771618  [UniProt]  [KEGG]COG1196: Chromosome segregation ATPases
66PLES_266712865267..2867456 [-], 2190218771619  [UniProt]  [KEGG]conserved hypothetical protein
67PLES_266812867461..2867964 [-], 504218771620  [UniProt]  [KEGG]conserved hypothetical protein
68PLES_266912868006..2868575 [-], 570218771621  [UniProt]  [KEGG]conserved hypothetical protein
69PLES_267012868578..2869315 [-], 738218771622  [UniProt]  [KEGG]conserved hypothetical protein
70PLES_267112869328..2869972 [-], 645218771623  [UniProt]  [KEGG]putative secreted protein
71PLES_267212869969..2870430 [-], 462218771624  [UniProt]  [KEGG]putative secreted proteinVF
72PLES_267312870707..2872986 [-], 2280218771625  [UniProt]  [KEGG]conserved hypothetical protein
73PLES_267412873123..2873428 [-], 306218771626  [UniProt]  [KEGG]hypothetical protein
74PLES_267512873518..2873838 [-], 321218771627  [UniProt]  [KEGG]hypothetical protein
75PLES_267612873889..2874998 [-], 1110218771628  [UniProt]  [KEGG]conserved hypothetical, plasmid-related protein
76PLES_267712875063..2875710 [-], 648218771629  [UniProt]  [KEGG]hypothetical protein
77PLES_267812875787..2876047 [-], 261218771630  [UniProt]  [KEGG]conserved Hypothetical protein
78PLES_267912876064..2876471 [-], 408218771631  [UniProt]  [KEGG]conserved Hypothetical protein
79PLES_268012876576..2876917 [-], 342218771632  [UniProt]  [KEGG]conserved plasmid protein
80PLES_268112877012..2877701 [-], 690218771633  [UniProt]  [KEGG]hypothetical protein
81PLES_268212877796..2878623 [-], 828218771634  [UniProt]  [KEGG]protein of unknown function DUF932VF
82PLES_268312878769..2879767 [-], 999218771635  [UniProt]  [KEGG]hypothetical protein
83PLES_268412879985..2880269 [-], 285218771636  [UniProt]  [KEGG]hypothetical protein
84PLES_268512880577..2880837 [-], 261218771637  [UniProt]  [KEGG]hypothetical protein
85PLES_268612881389..2881904 [-], 516pseudogene Tn3 family transposase (pseudogene)
86merA2881923..2883611 [-], 1689218771638  [UniProt]  [KEGG]Mercuric reductase MerA
87merP2883622..2883909 [-], 288218771639  [UniProt]  [KEGG]Periplasmic mercuric ion binding protein, MerP
88merT2883922..2884272 [-], 351218771640  [UniProt]  [KEGG]Mercuric transport protein MerT
89merR2884344..2884751 [+], 408218771641  [UniProt]  [KEGG]Regulatory protein merR
90PLES_269112885013..2885837 [-], 825218771642  [UniProt]  [KEGG]COG1100: GTPase SAR1 and related small G proteins
91PLES_269212886126..2886404 [-], 279218771643  [UniProt]  [KEGG]COG0528: Uridylate kinase
92PLES_269312886502..2887239 [-], 738218771644  [UniProt]  [KEGG]COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
93ORF C922887323..2888009 [-], 687218771645  [UniProt]  [KEGG]hypothetical protein
94PLES_269512888192..2888584 [-], 393218771646  [UniProt]  [KEGG]hypothetical protein
95PLES_269612888606..2889019 [-], 414218771647  [UniProt]  [KEGG]conserved hypothetical protein
96PLES_269712889156..2889467 [-], 312218771648  [UniProt]  [KEGG]hypothetical protein
97PLES_269812889804..2890304 [-], 501218771649  [UniProt]  [KEGG]putative lipoprotein signal peptidase LspA
98PLES_269912890308..2893262 [-], 2955218771650  [UniProt]  [KEGG]Heavy metal translocating P-type ATPase
99metR2893315..2893710 [+], 396218771651  [UniProt]  [KEGG]transcriptional regulator, MerR family
100PLES_270022894786..2895421 [+], 636218771652  [UniProt]  [KEGG]Co/Zn/Cd efflux system component
101PLES_270112896145..2898175 [-], 2031218771653  [UniProt]  [KEGG]DNA topoisomerase III
102PLES_270212898459..2898899 [-], 441218771654  [UniProt]  [KEGG]Putative single-stranded DNA binding protein
103PLES_270312898973..2899500 [-], 528218771655  [UniProt]  [KEGG]Putative integrase regulator R protein
104PLES_270412899497..2900288 [-], 792218771656  [UniProt]  [KEGG]Domain of unknown function DUF1845
105PLES_270512900718..2901956 [-], 1239218771657  [UniProt]  [KEGG]hypothetical protein
106PLES_270612901960..2902520 [-], 561218771658  [UniProt]  [KEGG]COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
107PLES_270712902535..2904214 [-], 1680218771659  [UniProt]  [KEGG]COG1475: Predicted transcriptional regulators
108PLES_270812904460..2905335 [-], 876218771660  [UniProt]  [KEGG]Cobyrinic acid a,c-diamide synthase
109ORF C1092905378..2905590 [-], 213218771661  [UniProt]  [KEGG]phage-related proteinVF
110PLES_271012905709..2906455 [-], 747218771662  [UniProt]  [KEGG]hypothetical protein
111PLES_271022906906..2907406 [+], 501218771663  [UniProt]  [KEGG]hypothetical protein
112PLES_271112908559..2911444 [+], 2886218771664 probable sensor/response regulator hybrid
113PLES_271212911535..2912068 [+], 534218771665 putative activator of osmoprotectant transporter
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins101Fasta
Identified as part of this study from FM209186

Genomics & Bioinformatics Group in MML, SJTU