ICEberg
ICEberg ID54
NameICETauDSM9187-1
FamilyICEclc
OrganismTolumonas auensis DSM 9187
Size (bp)97027
GC content [Genome] (%)62 [49]
Insertion sitetRNA-Gly(Tola_R0078)
Functionbeta-lactamase
Species that ICE can be transferred to-
Nucleotide SequenceCP001616 (complete ICE sequence in this genome)
Replicon chromosome (3471292 bp, Project:33873) [NC_012691]
Genome coordinates2621845..2718871
Link to view genome context of this ICE in the genome browser
in_silico This is a putative ICE identified in this study by Blast.
Complete gene list of ICETauDSM9187-1 form CP001616
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1Tola_23912618162..2619289 [+], 1128237501395 iron-sulfur cluster binding protein
2Tola_23922619299..2620042 [+], 744237501396 ROK family protein
3Tola_23932620089..2620994 [-], 906237501397 band 7 protein
4Tola_23942621845..2622597 [+], 753237501398  [UniProt]  [KEGG]conserved hypothetical protein
5Tola_23952622716..2622955 [+], 240237501399  [UniProt]  [KEGG]phage transcriptional regulator, AlpAVF
6Tola_23962622966..2623829 [+], 864237501400  [UniProt]  [KEGG]Cobyrinic acid ac-diamide synthase
7Tola_23972623813..2624073 [+], 261237501401  [UniProt]  [KEGG]conserved hypothetical protein
8Tola_23982624066..2625802 [+], 1737237501402  [UniProt]  [KEGG]conserved hypothetical protein
9Tola_23992625814..2626374 [+], 561237501403  [UniProt]  [KEGG]conserved hypothetical protein
10Tola_24002626374..2627579 [+], 1206237501404  [UniProt]  [KEGG]conserved hypothetical protein
11Tola_24012627938..2628726 [+], 789237501405  [UniProt]  [KEGG]Domain of unknown function DUF1845
12Tola_24022628723..2629253 [+], 531237501406  [UniProt]  [KEGG]conserved hypothetical protein
13Tola_24032629327..2629728 [+], 402237501407  [UniProt]  [KEGG]single-strand binding protein/Primosomal replication protein n
14Tola_24042630003..2632012 [+], 2010237501408  [UniProt]  [KEGG]DNA topoisomerase III
15Tola_24052632256..2632486 [-], 231237501409  [UniProt]  [KEGG]hypothetical protein
16Tola_24072632967..2634559 [+], 1593237501410  [UniProt]  [KEGG]conserved hypothetical protein
17Tola_24082634921..2635484 [+], 564237501411  [UniProt]  [KEGG]conserved hypothetical protein
18Tola_24102637424..2637636 [+], 213237501412  [UniProt]  [KEGG]conserved hypothetical protein
19Tola_24112637660..2638052 [+], 393237501413  [UniProt]  [KEGG]conserved hypothetical protein
20Tola_24122638150..2638611 [+], 462237501414  [UniProt]  [KEGG]hypothetical protein
21Tola_24132638711..2639373 [+], 663237501415  [UniProt]  [KEGG]conserved hypothetical protein
22Tola_24142639494..2640237 [+], 744237501416  [UniProt]  [KEGG]conserved hypothetical protein
23Tola_24152640529..2641341 [+], 813237501417  [UniProt]  [KEGG]conserved hypothetical protein
24Tola_24162641935..2642849 [+], 915237501418  [UniProt]  [KEGG]conserved hypothetical protein
25Tola_24172643003..2643830 [+], 828237501419  [UniProt]  [KEGG]protein of unknown function DUF932VF
26Tola_24182643929..2644621 [+], 693237501420  [UniProt]  [KEGG]conserved hypothetical protein
27Tola_24192644711..2645052 [+], 342237501421  [UniProt]  [KEGG]conserved hypothetical protein
28Tola_24202645136..2645792 [+], 657237501422  [UniProt]  [KEGG]conserved hypothetical protein
29Tola_24212645859..2646968 [+], 1110237501423  [UniProt]  [KEGG]conserved hypothetical protein
30Tola_24222647024..2647344 [+], 321237501424  [UniProt]  [KEGG]conserved hypothetical protein
31Tola_24232647431..2647739 [+], 309237501425  [UniProt]  [KEGG]conserved hypothetical protein
32Tola_24242647836..2650121 [+], 2286237501426  [UniProt]  [KEGG]helicase domain protein
33Tola_24252650255..2651031 [+], 777237501427  [UniProt]  [KEGG]conserved hypothetical protein
34Tola_24262651101..2652915 [-], 1815237501428  [UniProt]  [KEGG]UvrD/REP helicase
35Tola_24272652902..2654689 [-], 1788237501429  [UniProt]  [KEGG]conserved hypothetical protein
36Tola_24282654915..2655478 [+], 564237501430  [UniProt]  [KEGG]conserved hypothetical proteinVF
37Tola_24292655475..2656134 [+], 660237501431  [UniProt]  [KEGG]conserved hypothetical protein
38Tola_24302656147..2656875 [+], 729237501432  [UniProt]  [KEGG]putative secreted protein
39Tola_24312656857..2657447 [+], 591237501433  [UniProt]  [KEGG]Lytic transglycosylase catalytic
40Tola_24322657444..2657989 [+], 546237501434  [UniProt]  [KEGG]putative secreted protein
41Tola_24332657994..2660183 [+], 2190237501435  [UniProt]  [KEGG]conserved hypothetical protein
42Tola_24342660180..2660929 [+], 750237501436  [UniProt]  [KEGG]conserved hypothetical protein
43Tola_24352660930..2662300 [-], 1371237501437  [UniProt]  [KEGG]conserved hypothetical protein
44Tola_24362662464..2662841 [+], 378237501438  [UniProt]  [KEGG]conserved hypothetical protein
45Tola_24372662838..2663071 [+], 234237501439  [UniProt]  [KEGG]conserved hypothetical protein
46Tola_24382663088..2663450 [+], 363237501440  [UniProt]  [KEGG]conserved hypothetical protein
47Tola_24392663461..2663859 [+], 399237501441  [UniProt]  [KEGG]conserved hypothetical protein
48Tola_24402663856..2664536 [+], 681237501442  [UniProt]  [KEGG]putative secreted protein
49Tola_24412664533..2665435 [+], 903237501443  [UniProt]  [KEGG]putative secreted protein
50Tola_24422665425..2666834 [+], 1410237501444  [UniProt]  [KEGG]putative secreted protein
51Tola_24432666815..2667249 [+], 435237501445  [UniProt]  [KEGG]putative secreted protein
52Tola_24442667249..2670125 [+], 2877237501446  [UniProt]  [KEGG]conserved hypothetical protein
53Tola_24452670141..2670899 [+], 759237501447  [UniProt]  [KEGG]DsbA-thioredoxin family protein
54Tola_24462671071..2671577 [+], 507237501448  [UniProt]  [KEGG]DNA repair protein RadCVF
55Tola_24472671713..2672213 [+], 501237501449  [UniProt]  [KEGG]protein of unknown function DUF1525
56Tola_24482672210..2673142 [+], 933237501450  [UniProt]  [KEGG]protein of unknown function DUF1527
57Tola_24492673153..2674550 [+], 1398237501451  [UniProt]  [KEGG]conserved hypothetical protein
58Tola_24502674547..2674897 [+], 351237501452  [UniProt]  [KEGG]conserved hypothetical protein
59Tola_24512674911..2676431 [+], 1521237501453  [UniProt]  [KEGG]conserved hypothetical protein
60Tola_24522676442..2676807 [-], 366237501454  [UniProt]  [KEGG]conserved hypothetical protein
61Tola_24532676835..2677293 [-], 459237501455  [UniProt]  [KEGG]conserved hypothetical proteinTA
62Tola_24542677293..2677610 [-], 318237501456  [UniProt]  [KEGG]transcriptional regulator, AbrB familyTA
63Tola_24552677917..2679773 [+], 1857237501457  [UniProt]  [KEGG]Relaxase
64Tola_24572680241..2681149 [-], 909237501458  [UniProt]  [KEGG]carbamate kinase
65Tola_24582681151..2682152 [-], 1002237501459  [UniProt]  [KEGG]ornithine carbamoyltransferase
66Tola_24592682171..2683400 [-], 1230237501460  [UniProt]  [KEGG]Arginine deiminase
67Tola_24602683425..2684870 [-], 1446237501461  [UniProt]  [KEGG]C4-dicarboxylate anaerobic carrier
68Tola_24612685394..2687337 [-], 1944237501462  [UniProt]  [KEGG]Protein of unknown function DUF676 hydrolase domain protein
69Tola_24622687334..2688377 [-], 1044237501463  [UniProt]  [KEGG]conserved hypothetical protein
70Tola_24632688377..2689009 [-], 633237501464  [UniProt]  [KEGG]transcriptional regulator, TetR family
71Tola_24642689453..2690940 [+], 1488237501465  [UniProt]  [KEGG]RND efflux system, outer membrane lipoprotein, NodT family
72Tola_24652690955..2692034 [+], 1080237501466  [UniProt]  [KEGG]secretion protein HlyD family protein
73Tola_24662692038..2694806 [+], 2769237501467  [UniProt]  [KEGG]ABC transporter related
74Tola_24672694808..2695938 [+], 1131237501468  [UniProt]  [KEGG]ABC-2 type transporter
75Tola_24682695986..2696447 [+], 462237501469  [UniProt]  [KEGG]conserved hypothetical protein
76Tola_24692696437..2697183 [+], 747237501470  [UniProt]  [KEGG]acetoacetyl-CoA reductase
77Tola_24702697269..2699773 [+], 2505237501471  [UniProt]  [KEGG]conserved hypothetical protein
78Tola_24712699770..2701191 [+], 1422237501472  [UniProt]  [KEGG]Phosphate acetyltransferase
79Tola_24722701235..2701987 [+], 753237501473  [UniProt]  [KEGG]short-chain dehydrogenase/reductase SDR
80Tola_24732702064..2703305 [+], 1242237501474  [UniProt]  [KEGG]acetate kinase
81Tola_24742703302..2704507 [+], 1206237501475  [UniProt]  [KEGG]sodium/glutamate symporter
82Tola_24752704688..2706439 [+], 1752237501476  [UniProt]  [KEGG]Poly-beta-hydroxybutyrate polymerase domain protein
83Tola_24762706526..2707020 [+], 495237501477  [UniProt]  [KEGG]UspA domain protein
84Tola_24772707017..2708090 [+], 1074237501478  [UniProt]  [KEGG]conserved hypothetical protein
85Tola_24782708090..2708221 [+], 132237501479  [UniProt]  [KEGG]hypothetical protein
86Tola_24792708294..2709190 [+], 897237501480  [UniProt]  [KEGG]ribose-phosphate pyrophosphokinase
87Tola_24802709229..2711607 [+], 2379237501481  [UniProt]  [KEGG]D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
88Tola_24812711643..2713001 [+], 1359237501482  [UniProt]  [KEGG]beta-lactamase domain protein
89Tola_24822712998..2714515 [+], 1518237501483  [UniProt]  [KEGG]thymidine phosphorylase
90Tola_24832714702..2715592 [+], 891237501484  [UniProt]  [KEGG]transcriptional regulator, LysR family
91Tola_24842715618..2715911 [-], 294237501485  [UniProt]  [KEGG]transcriptional regulator, XRE family
92Tola_24852716014..2716655 [+], 642237501486  [UniProt]  [KEGG]transcriptional regulator, LysR family
93Tola_24862716714..2718645 [-], 1932237501487  [UniProt]  [KEGG]integrase family protein
94Tola_24872719255..2719800 [-], 546237501488 Exonuclease RNase T and DNA polymerase III
95Tola_24882719878..2720912 [+], 1035237501489 ribosome small subunit-dependent GTPase A
96Tola_24892720985..2721860 [+], 876237501490 phosphatidylserine decarboxylase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins90Fasta
Identified as part of this study from CP001616