ICEberg
ICEberg ID62
NameCTn6002
FamilyTn916
OrganismStreptococcus cristatus unknown strain(s)
Size (bp)20880
GC content [Genome] (%)38.2
Insertion site-
FunctionErythromycin resistance
Species that ICE can be transferred toStreptococcus cristatus; Streptococcus sanguinis
Nucleotide SequenceAY898750 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..20880
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of CTn6002 form AY898750
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-194..313 [+], 12067043683  [UniProt] hypothetical protein
2-336..650 [+], 31567043684  [UniProt] hypothetical protein
3-666..1052 [+], 38767043685  [UniProt] hypothetical protein
4-1081..2466 [+], 138667043686  [UniProt] hypothetical protein
5-2860..4062 [+], 120367043687  [UniProt] hypothetical protein
6-3895..4062 [+], 168119514809  [UniProt] MLS leader peptide
7-4111..4194 [+], 8467043688  [UniProt] MLS leader peptide
8-4319..5056 [+], 73867043689  [UniProt] MLS methylaseAR
9-5001..5192 [+], 19267043690  [UniProt] hypothetical protein
10-5313..6560 [-], 124867043691  [UniProt] hypothetical protein
11-6740..6961 [+], 22267043692  [UniProt] hypothetical protein
12-7078..7575 [+], 49867043693  [UniProt] hypothetical protein
13-7550..8056 [+], 50767043694  [UniProt] hypothetical protein
14-8040..10487 [+], 244867043695  [UniProt] hypothetical protein
15-10490..12667 [+], 217867043696  [UniProt] hypothetical protein
16-12664..13449 [+], 78667043697  [UniProt] hypothetical proteinVF
17-13662..14594 [+], 93367043698  [UniProt] hypothetical protein
18-14869..14955 [+], 8767043699  [UniProt] hypothetical protein
19-14971..16890 [+], 192067043700  [UniProt] tetracycline resistance protein TetMAR
20-16988..17176 [+], 18967043708  [UniProt] hypothetical protein
21-17236..17589 [-], 35467043701  [UniProt] hypothetical protein
22-17794..17865 [+], 7267043702  [UniProt] hypothetical protein
23-18043..18516 [+], 474119514810  [UniProt] hypothetical protein
24-18513..18743 [+], 23167043704  [UniProt] hypothetical protein
25-18969..19220 [-], 25267043705  [UniProt] hypothetical protein
26-19204..19407 [+], 20467043706  [UniProt] Xis-Tn
27-19489..20706 [+], 121867043707  [UniProt] Int-Tn
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins27Fasta
(1) Warburton PJ; Palmer RM; Munson MA; Wade WG (2007). Demonstration of in vivo transfer of doxycycline resistance mediated by a novel transposon. J Antimicrob Chemother. 60(5):973-80. [PudMed:17855723] experimental
 
experimental experimental literature