ICEberg
ICEberg ID63
NameCTn86
FamilyUnclassified
OrganismBacteroides fragilis 86-5443-2-2
Size (bp)-
GC content [Genome] (%)-
Insertion site-
Function-
Species that ICE can be transferred toBacteroides fragilis
Nucleotide SequenceAY372755; AY375536 (partical ICE sequence)
experimental This is a ICE derived from experimental literature.
Incomplete gene list of CTn86 from AY372755
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1per302..1915 [+], 161435286077 ABC transporter permease protein
2tnpB1871..2713 [-], 84335286078  [UniProt] TnpB
3tnpA12682..4241 [-], 156035286079  [UniProt] TnpA1
4-5152..6096 [-], 94535286080  [UniProt] unknown
5bfmA7727..8269 [+], 5434164089  [UniProt] BfmA
6bfmB8259..9209 [+], 9514164091  [UniProt] BfmB
7-9470..9847 [+], 3784164095  [UniProt] unknown
8bft10117..11286 [-], 117037051372  [UniProt] Bft
9mpII12998..14188 [+], 11913033561  [UniProt] MpII
10bfmC15246..16850 [-], 16054164093  [UniProt] BfmC
11-16929..17282 [-], 35435286081  [UniProt] unknown
12-17293..20040 [-], 274835286082  [UniProt] unknown
13-20037..20957 [-], 92135286083  [UniProt] unknown
14-21045..22352 [-], 130835286084  [UniProt] unknown
15-22358..22762 [-], 40535286085  [UniProt] unknown
16-23329..23889 [+], 56135286086  [UniProt] RNA polymerase ECF-type sigma factor
Incomplete gene list of CTn86 from AY375536
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-259..702 [-], 44437538064  [UniProt] ORF-58A
2-890..1501 [-], 61237538065  [UniProt] ORF-58B
3-1540..2037 [-], 49837538066  [UniProt] ORF-59
4-2956..3273 [-], 31837538067  [UniProt] ORF-60
5tnpA24052..4426 [-], 37537538068  [UniProt] TnpA2
6bexB4599..5963 [-], 136537538069 putative Na+-driven multidrug efflux pump
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences2Fasta
Proteins20Fasta
(1) Franco AA (2004). The Bacteroides fragilis pathogenicity island is contained in a putative novel conjugative transposon. J Bacteriol. 186(18):6077-92. [PudMed:15342577] experimental
 
experimental experimental literature