ICEberg
ICEberg ID67
NameTn6000 (EfcTn1)
FamilyUnclassified
OrganismEnterococcus casseliflavus 664.1H1
Size (bp)33262
GC content [Genome] (%)34.7
Insertion siteribosomal L31 gene
FunctionTetracycline resistance
Species that ICE can be transferred toEnterococcus faecium
Nucleotide SequenceFN555436 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..33262
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of Tn6000 (EfcTn1) form FN555436
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-643..2055 [+], 1413283466064  [UniProt] hypothetical protein
2-2099..2818 [-], 720283466065  [UniProt] hypothetical protein
3-3081..4877 [+], 1797283466066  [UniProt] hypothetical protein
4-4968..6047 [+], 1080283466067  [UniProt] hypothetical protein
5-6269..6676 [+], 408283466068  [UniProt] hypothetical protein
6-6824..7138 [+], 315283466069  [UniProt] hypothetical protein
7-7154..7519 [+], 366283466070  [UniProt] hypothetical protein
8-7523..8899 [+], 1377283466071  [UniProt] hypothetical protein
9-8889..9173 [+], 285283466072  [UniProt] hypothetical protein
10-9679..9873 [+], 195283466073  [UniProt] hypothetical protein
11-10212..11195 [+], 984283466074  [UniProt] hypothetical protein
12-11209..11430 [+], 222283466075  [UniProt] hypothetical protein
13-11447..11947 [+], 501283466076  [UniProt] hypothetical protein
14vap12081..12890 [+], 810283466077  [UniProt] virulence associated protein
15hel12880..16017 [+], 3138283466078  [UniProt] DEAD-DEAH box helicase
16-16164..16457 [+], 294283466079  [UniProt] hypothetical protein
17-16744..18888 [+], 2145283466080  [UniProt] hypothetical protein
18-18848..21136 [+], 2289283466081  [UniProt] hypothetical protein
19-21147..22109 [+], 963283466082  [UniProt] hypothetical proteinVF
20rvt22822..24651 [+], 1830283466083  [UniProt] reverse transcriptase
21-24747..24812 [+], 66283466084  [UniProt] hypothetical protein
22-24829..25746 [+], 918283466085  [UniProt] hypothetical protein
23tet(S)26590..28515 [+], 1926283466086  [UniProt] Tet(S)AR
24-28639..28770 [+], 132283466087  [UniProt] hypothetical protein
25-29284..29643 [-], 360283466088  [UniProt] hypothetical protein
26-30122..30622 [+], 501283466089  [UniProt] hypothetical protein
27-30693..30818 [+], 126283466090  [UniProt] hypothetical protein
28xis600031604..31879 [+], 276283466091  [UniProt] Xis6000 protein
29int600031979..33211 [+], 1233283466092  [UniProt] Int6000 protein
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins29Fasta
(1) Brouwer MS; Mullany P; Roberts AP (2010). Characterization of the conjugative transposon Tn6000 from Enterococcus casseliflavus 664.1H1 (formerly Enterococcus faecium 664.1H1). FEMS Microbiol Lett. 309(1):71-6. [PudMed:20528943] experimental
(2) Roberts AP; Davis IJ; Seville L; Villedieu A; Mullany P (2006). Characterization of the ends and target site of a novel tetracycline resistance-encoding conjugative transposon from Enterococcus faecium 664.1H1. J Bacteriol. 188(12):4356-61. [PudMed:16740942] experimental
 
experimental experimental literature