ICEberg
ICEberg ID68
NameICE6013
FamilyICE6013
OrganismStaphylococcus aureus HDG2
Size (bp)19905
GC content [Genome] (%)29.6
Insertion site-
Function-
Species that ICE can be transferred toStaphylococcus aureus
Nucleotide SequenceFJ231270 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..19905
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICE6013 form FJ231270
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-221..574 [-], 354209486297  [UniProt] Tra8
2-858..1673 [-], 816209486298  [UniProt] unknown
3-1666..3108 [-], 1443209486299  [UniProt] unknown
4-3080..3673 [-], 594209486300  [UniProt] BinL
5-3937..4317 [-], 381209486301  [UniProt] BlaI
6-4307..6064 [-], 1758209486302  [UniProt] BlaR1
7-6171..7016 [+], 846209486303  [UniProt] BlaZAR
8-7277..7792 [-], 516209486304  [UniProt] Tra8
9-7901..8257 [-], 357209486305  [UniProt] hypothetical protein
10-8313..8903 [-], 591209486306  [UniProt] hypothetical protein
11-8910..9956 [-], 1047209486307  [UniProt] unknown
12-9946..11793 [-], 1848209486308  [UniProt] ribonuclease E domain protein
13-11798..13156 [-], 1359209486309  [UniProt] FtsK
14-13210..15705 [-], 2496209486310  [UniProt] VirB4
15-15740..16123 [-], 384209486311  [UniProt] hypothetical protein
16-16135..16395 [-], 261209486312  [UniProt] hypothetical protein
17-16400..17455 [-], 1056209486313  [UniProt] hypothetical protein
18-17516..18607 [-], 1092209486314  [UniProt] RstA
19-18782..19084 [-], 303209486315  [UniProt] hypothetical protein
20-19098..19418 [-], 321209486316  [UniProt] unknown
21-19569..19853 [-], 285209486317  [UniProt] hypothetical protein
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins21Fasta
(1) Smyth DS; Robinson DA (2009). Integrative and sequence characteristics of a novel genetic element, ICE6013, in Staphylococcus aureus. J Bacteriol. 191(19):5964-75. [PudMed:19648240] experimental
 
experimental experimental literature