ICEberg
ICEberg ID69
NameICEA(5632)-I
FamilyICEA5632
OrganismMycoplasma agalactiae 5632
Size (bp)27235
GC content [Genome] (%)27 [30]
Insertion site-
Function-
Species that ICE can be transferred toMycoplasma agalactiae
Nucleotide SequenceFP671138 (complete ICE sequence in this genome)
Replicon-
Genome coordinates813253..840487
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICEA(5632)-I form FP671138
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1MAGa6860811209..811784 [+], 576290752914 Hypothetical protein, predicted lipoprotein
2MAGa6870812450..812956 [+], 507290752915 Hypothetical protein
3MAGa6880813253..814389 [-], 1137290752916  [UniProt] CDS22
4MAGa6890814993..815187 [+], 195290752917  [UniProt] -
5MAGa6900815174..815845 [+], 672290752918  [UniProt] CDSH
6MAGa6910816036..816875 [+], 840290752919  [UniProt] CDSG
7MAGa6920816966..817319 [+], 354290752920  [UniProt] Hypothetical protein
8MAGa6930817490..818752 [+], 1263290752921  [UniProt] CDSF
9MAGa6940818878..820455 [-], 1578290752922  [UniProt] CDS14
10MAGa6950820773..821225 [-], 453290752923  [UniProt] CDSE
11MAGa6960821600..826153 [-], 4554290752924  [UniProt] CDS19
12MAGa6970826159..828945 [-], 2787290752925  [UniProt] CDS17
13MAGa6980828932..829372 [-], 441290752926  [UniProt] CDS27
14MAGa6990829519..830592 [-], 1074290752927  [UniProt] CDS16
15MAGa7000830597..830962 [-], 366290752928  [UniProt] CDS15
16MAGa7010830965..831219 [-], 255290752929  [UniProt] CDS13
17MAGa7020831368..832348 [-], 981290752930  [UniProt] CDS7
18MAGa7030832398..834410 [-], 2013290752931  [UniProt] CDS5
19MAGa7040834505..835158 [-], 654290752932  [UniProt] CDSD
20MAGa7050835211..835771 [-], 561290752933  [UniProt] CDSC
21MAGa7060835860..836312 [-], 453290752934  [UniProt] CDSB
22MAGa7070836349..837014 [-], 666290752935  [UniProt] CDS11
23MAGa7080837030..837434 [-], 405290752936  [UniProt] CDS12
24MAGa7090837440..838453 [-], 1014290752937  [UniProt] CDSA
25MAGa7100839693..840487 [-], 795290752938  [UniProt] CDS1
26MAGa7110841086..841640 [+], 555290752939 Pseudogene of Transposase
27MAGa7120841622..842305 [+], 684290752940 -
28MAGa7130842799..843599 [+], 801290752941 Hypothetical protein, predicted lipoprotein
29rplL843682..844053 [-], 372290752942 50S ribosomal protein L7/L12
30rplJ844080..844601 [-], 522290752943 50S ribosomal protein L10
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins23Fasta
(1) Nouvel LX; Sirand-Pugnet P; Marenda MS; Sagne E; Barbe V; Mangenot S; Schenowitz C; Jacob D; Barre A; Claverol S; Blanchard A; Citti C (2010). Comparative genomic and proteomic analyses of two Mycoplasma agalactiae strains: clues to the macro- and micro-events that are shaping mycoplasma diversity. BMC Genomics. 11:86. [PudMed:20122262]
(2) Marenda M; Barbe V; Gourgues G; Mangenot S; Sagne E; Citti C (2006). A new integrative conjugative element occurs in Mycoplasma agalactiae as chromosomal and free circular forms. J Bacteriol. 188(11):4137-41. [PudMed:16707706] experimental
 
experimental experimental literature