ICEberg
ICEberg ID70
NameICEEc1
FamilyICEKp1
OrganismEscherichia coli ECOR31
Size (bp)38927
GC content [Genome] (%)48
Insertion sitetRNA-Asn
FunctionPathogenicity
Species that ICE can be transferred toEscherichia coli
Nucleotide SequenceAY233333 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..38927
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICEEc1 form AY233333
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1fyuA1..2022 [+], 202237927517  [UniProt] FyuAVF
2-6054..6338 [-], 28537927548  [UniProt] unknown
3-6362..7072 [+], 71137927518  [UniProt] Pilx1/VirB1-like protein
4-7072..7365 [+], 29437927519  [UniProt] VirB2-like protein
5-7378..10116 [+], 273937927537  [UniProt] Pilx3-4/VirB3-4-like protein
6-10134..10841 [+], 70837927520  [UniProt] Pilx5/VirB5-like protein
7-10849..11091 [+], 24337927538  [UniProt] unknown
8-11095..12168 [+], 107437927521  [UniProt] Pilx6/VirB6-like protein
9-12260..12397 [+], 13837927541  [UniProt] unknown
10-12390..13073 [+], 68437927536  [UniProt] PilX8-VirB8-like protein
11-13070..13978 [+], 90937927522  [UniProt] Pilx9/VirB9-like protein
12-14022..15272 [+], 125137927523  [UniProt] Pilx10/VirB10-like protein
13-15262..16287 [+], 102637927524  [UniProt] Pilx11/VirB11-like proteinVF
14-16717..17022 [+], 30637927525  [UniProt] YggA-like protein
15-17056..17361 [+], 30637927542  [UniProt] unknown
16-17472..17774 [+], 30337927543  [UniProt] unknown
17-18041..19930 [+], 189037927526  [UniProt] MobB-like protein
18-19940..20686 [+], 74737927527  [UniProt] MobC-like protein
19-20747..23641 [-], 289537927528  [UniProt] helicase-like protein
20-24254..25033 [-], 78037927539  [UniProt] VrlR-like protein
21-25337..26284 [-], 94837927530  [UniProt] antirestriction protein
22-26817..27848 [+], 103237927529  [UniProt] TnpA-like protein
23-28380..28640 [+], 26137927544  [UniProt] unknown
24-28650..29252 [+], 60337927545  [UniProt] unknown
25-29598..30134 [-], 53737927531  [UniProt] VC0181-like protein
26-30198..31814 [-], 161737927532  [UniProt] VC0180-like protein
27-31814..33112 [-], 129937927533  [UniProt] VC0179-like protein
28-33112..34197 [-], 108637927534  [UniProt] VC0178-like protein
29-34606..36324 [-], 171937927546  [UniProt] unknown
30-36412..37305 [-], 89437927547  [UniProt] unknown
31-37401..38282 [-], 88237927535  [UniProt] patatin-like protein
32-38778..39002 [+], 22537927540 unknown
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins31Fasta
(1) Schubert S; Dufke S; Sorsa J; Heesemann J (2004). A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity island. Mol Microbiol. 51(3):837-48. [PudMed:14731283] experimental
 
experimental experimental literature