ICEberg
ICEberg ID72
NameICEF-I
FamilyICEF-I/II
OrganismMycoplasma fermentans PG18
Size (bp)23773
GC content [Genome] (%)28
Insertion sitepdhA, orf251
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAY168953 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates2674..26451
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICEF-I form AY168953
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1licA18..746 [-], 72926984083 LicA
2lepA834..2633 [+], 180026984084 LepA
3-2918..3637 [+], 72026984085  [UniProt] ICEF-IA ORF1
4-3909..5111 [+], 120326984086  [UniProt] ICEF-IA ORF3
5-5121..5588 [+], 46826984087  [UniProt] ICEF-IA ORF4
6ICEF-IA ORF55588..7807 [+], 2220pseudogene -
7-7818..8006 [+], 18926984088  [UniProt] ICEF-IA ORF6
8-8008..8955 [+], 94826984089  [UniProt] ICEF-IA ORF7
9-8964..9152 [+], 18926984090  [UniProt] ICEF-IA ORF8a
10-9142..10008 [+], 86726984091  [UniProt] ICEF-IA ORF9
11-10079..10243 [+], 16526984092  [UniProt] ICEF-IA ORF10
12-10259..10972 [+], 71426984093  [UniProt] ICEF-IA ORF11
13-10982..11533 [+], 55226984094  [UniProt] single-stranded DNA binding protein
14-11533..11787 [+], 25526984095  [UniProt] ICEF-IA ORF13
15-11811..13379 [+], 156926984096  [UniProt] P57' lipoprotein
16-13494..13775 [+], 28226984097  [UniProt] ICEF-IA ORF15
17-13775..14965 [+], 119126984098  [UniProt] ICEF-IA ORF16
18-14981..17794 [+], 281426984099  [UniProt] TraE/TrsE family NTPase
19-17775..18461 [+], 68726984100  [UniProt] ICEF-IA ORF18
20ICEF-IA ORF1818543..21851 [+], 3309pseudogene -
21-23223..23702 [+], 48026984101  [UniProt] ICEF-IA ORF20
22-23935..24861 [+], 92726984102  [UniProt] ICEF-IA ORF21
23-24909..26075 [+], 116726984103  [UniProt] ICEF-IA ORF22
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins19Fasta
(1) Calcutt MJ; Lewis MS; Wise KS (2002). Molecular genetic analysis of ICEF, an integrative conjugal element that is present as a repetitive sequence in the chromosome of Mycoplasma fermentans PG18. J Bacteriol. 184(24):6929-41. [PudMed:12446643] experimental
 
experimental experimental literature