ICEberg
ICEberg
ICEberg ID77
NameICESe2
FamilyUnclassified
OrganismStreptococcus equi subsp. equi 4047
Size (bp)63055
GC content [Genome] (%)31 [41]
Insertion site-
FunctionNon-ribosomal peptide synthetase (NRPS) system and iron acquisition
Species that ICE can be transferred toStreptococcus equi
Nucleotide SequenceFM204883 (complete ICE sequence in this genome)
Replicon chromosome (2253793 bp, Project:30765) [NC_012471]
Genome coordinates1206317..1269371
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of ICESe2 form FM204883
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1SEQ_12221201621..1202475 [-], 855225699975 putative GTPase protein
2SEQ_12231203068..1203700 [-], 633pseudogene putative ABC transporter ATP-binding protein (pseudogene)
3SEQ_12251203702..1204571 [-], 870pseudogene putative membrane protein (fragment)
4SEQ_12261204568..1204900 [-], 333pseudogene putative cell surface-anchored thioredoxin (fragment)
5SEQ_12271204940..1205455 [+], 516225699976 putative transposase
6SEQ_12281205479..1206282 [+], 804225699977 putative transposase
7SEQ_12291206307..1207161 [-], 855225699978 putative conjugative transposon site-specific recombinase
8SEQ_12311207922..1208323 [-], 402225699979  [UniProt]  [KEGG]putative DNA-binding protein
9SEQ_12321209169..1209414 [-], 246225699980  [UniProt]  [KEGG]hypothetical protein
10eqbN1209536..1210441 [-], 906225699981  [UniProt]  [KEGG]putative hydrolase
11eqbM1210463..1211527 [-], 1065225699982  [UniProt]  [KEGG]putative oxidoreductase
12eqbL1211547..1213292 [-], 1746225699983  [UniProt]  [KEGG]ABC transporter, ATP-binding membrane proteinVF
13eqbK1213297..1215054 [-], 1758225699984  [UniProt]  [KEGG]ABC transporter, ATP-binding membrane protein
14eqbJ1215077..1216453 [-], 1377225699985  [UniProt]  [KEGG]ABC transporter, ATP-binding component
15eqbI1216467..1217138 [-], 672225699986  [UniProt]  [KEGG]ABC transporter permease protein
16eqbH1217140..1217727 [-], 588225699987  [UniProt]  [KEGG]ABC transporter permease protein
17eqbG1217717..1221535 [-], 3819225699988  [UniProt]  [KEGG]equibactin nonribosomal peptide synthase protein
18eqbF1221519..1223645 [-], 2127225699989  [UniProt]  [KEGG]putative thiazoline reductase
19eqbE1223642..1229713 [-], 6072225699990  [UniProt]  [KEGG]equibactin nonribosomal peptide synthase protein
20eqbD1229728..1231311 [-], 1584225699991  [UniProt]  [KEGG]putative salicylate-AMP-ligaseVF
21eqbC1231320..1232003 [-], 684225699992  [UniProt]  [KEGG]putative 4'-phosphopantetheinyl transferase
22eqbB1231990..1232739 [-], 750225699993  [UniProt]  [KEGG]putative non-ribosomal peptide synthesis thioesterase type II
23eqbA1232968..1233348 [-], 381225699994  [UniProt]  [KEGG]iron-dependent repressor protein
24SEQ_12471233405..1233563 [-], 159225699995  [UniProt]  [KEGG]putative conjugative transposon membrane protein
25SEQ_12491233885..1234253 [+], 369225699996  [UniProt]  [KEGG]putative conjugative transposon mobilization protein
26SEQ_12501234253..1235626 [+], 1374225699997  [UniProt]  [KEGG]putative conjugative transposon mobilization protein
27SEQ_12511235736..1236221 [-], 486225699998  [UniProt]  [KEGG]putative conjugative transposon membrane protein
28SEQ_12521236379..1237818 [-], 1440225699999  [UniProt]  [KEGG]putative conjugative transposon single-strand binding protein
29SEQ_12531237819..1249746 [-], 11928225700000  [UniProt]  [KEGG]putative conjugative transposon DNA recombination protein
30SEQ_12541249763..1250509 [-], 747225700001  [UniProt]  [KEGG]conjugative transposon hypothetical protein
31SEQ_12551250551..1251102 [-], 552225700002  [UniProt]  [KEGG]conjugative transposon hypothetical protein
32SEQ_12561251106..1252818 [-], 1713225700003  [UniProt]  [KEGG]putative DNA topoisomerase
33SEQ_12571252990..1253832 [-], 843225700004  [UniProt]  [KEGG]putative abortive infection protein
34SEQ_12581253825..1254418 [-], 594225700005  [UniProt]  [KEGG]conjugative transposon hypothetical protein
35SEQ_12591254671..1256134 [-], 1464225700006  [UniProt]  [KEGG]putative membrane protein
36SEQ_12601256112..1256399 [-], 288225700007  [UniProt]  [KEGG]conjugative transposon hypothetical protein
37SEQ_12611256412..1258700 [-], 2289225700008  [UniProt]  [KEGG]putative conjugative transposon membrane protein
38SEQ_12621258666..1259700 [-], 1035225700009  [UniProt]  [KEGG]modification DNA methylase
39SEQ_12631259693..1262119 [-], 2427225700010  [UniProt]  [KEGG]putative conjugal transfer protein
40SEQ_12641262130..1262540 [-], 411225700011  [UniProt]  [KEGG]putative conjugative transposon membrane protein
41SEQ_12651262544..1263038 [-], 495225700012  [UniProt]  [KEGG]putative conjugative transposon membrane protein
42SEQ_12661263111..1263929 [-], 819225700013  [UniProt]  [KEGG]putative conjugative transposon membrane protein
43SEQ_12671263974..1264189 [-], 216225700014  [UniProt]  [KEGG]putative conjugative transposon membrane protein
44SEQ_12681264547..1265143 [-], 597225700015  [UniProt]  [KEGG]putative conjugative transposon exported protein
45SEQ_12691265140..1265814 [-], 675225700016  [UniProt]  [KEGG]putative ABC transporter, ATP-binding protein
46SEQ_12701265815..1267983 [-], 2169225700017  [UniProt]  [KEGG]putative membrane protein
47SEQ_12711268091..1268474 [-], 384225700018  [UniProt]  [KEGG]putative bacteriocin
48SEQ_12721268752..1269399 [-], 648pseudogene putative two-component sensor histidine kinase (fragment)
49SEQ_12731269450..1270130 [-], 681pseudogene conserved hypothetical protein (fragment)
50SEQ_12741270226..1271191 [-], 966225700019 ParB-like nuclease protein
51SEQ_12751271184..1271960 [-], 777225700020 sporulation initiation inhibitor Soj homolog
52SEQ_12761272106..1273275 [-], 1170pseudogene putative ABC transporter ATP-binding membrane protein (fragment)
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins40Fasta
(1) Holden MT; Heather Z; Paillot R; Steward KF; Webb K; Ainslie F; Jourdan T; Bason NC; Holroyd NE; Mungall K; Quail MA; Sanders M; Simmonds M; Willey D; Brooks K; Aanensen DM; Spratt BG; Jolley KA; Maiden MC; Kehoe M; Chanter N; Bentley SD; Robinson C; Maskell DJ; Parkhill J; Waller AS (2009). Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens. PLoS Pathog. 5(3):e1000346. [PudMed:19325880]
(2) Heather Z; Holden MT; Steward KF; Parkhill J; Song L; Challis GL; Robinson C; Davis-Poynter N; Waller AS (2008). A novel streptococcal integrative conjugative element involved in iron acquisition. Mol Microbiol. 70(5):1274-92. [PudMed:18990191] experimental
 
experimental experimental literature