ICEberg
ICEberg ID80
NameICESpn8140
FamilyICESt1
OrganismStreptococcus pneumoniae 8140
Size (bp)26888
GC content [Genome] (%)36
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFR671412 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..26888
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESpn8140 form FR671412
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-323..511 [+], 189321157303  [UniProt] Conserved hypothetical protein
2-504..1115 [+], 612321157304  [UniProt] Fic/DOC domain protein
3-1370..1732 [+], 363321157305  [UniProt] Membrane protein
4-2050..2646 [-], 597321157306  [UniProt] Response regulator
5-2627..3868 [-], 1242321157307  [UniProt] Sensor histidine kinase
6-3890..4060 [+], 171321157308  [UniProt] Hypothetical protein
7-4104..4244 [-], 141321157309  [UniProt] Hypothetical protein
8-4282..6297 [-], 2016321157310  [UniProt] ABC transporter, permease subunit
9-6310..7047 [-], 738321157311  [UniProt] ABC-type antimicrobial peptide transport system, ATPase component
10-7407..7520 [-], 114321157312  [UniProt] Hypothetical protein
11-7851..8213 [-], 363321157313  [UniProt] Hypothetical protein
12-8270..8956 [-], 687321157314  [UniProt] Helix-turn-helix DNA binding protein
13-8965..9825 [-], 861321157315  [UniProt] Conserved hypothetical protein
14-9946..10131 [-], 186321157316  [UniProt] Conserved hypothetical protein
15-10112..11125 [-], 1014321157317  [UniProt] Conserved hypothetical protein
16-11155..11571 [-], 417321157318  [UniProt] Putative FMN-binding protein
17-11626..11976 [-], 351321157319  [UniProt] Helix-turn-helix DNA binding protein
18-12638..12820 [+], 183321157320  [UniProt] Hypothetical protein
19-12855..13151 [+], 297321157321  [UniProt] Conserved hypothetical protein
20-13173..13634 [+], 462321157322  [UniProt] Conserved hypothetical protein
21-13648..15336 [+], 1689321157323  [UniProt] FtsK/SpoIIIE protein
22-15544..16776 [+], 1233321157324  [UniProt] Helix-turn-helix DNA binding protein
23-16791..17024 [+], 234321157325  [UniProt] Conserved hypothetical protein
24-17026..17583 [+], 558321157326  [UniProt] Putative transfer protein
25-17594..18589 [+], 996321157327  [UniProt] Putative transfer protein
26-18599..18823 [+], 225321157328  [UniProt] Conserved hypothetical protein
27-18826..19236 [+], 411321157329  [UniProt] Putative transfer protein
28-19250..21754 [+], 2505321157330  [UniProt] Putative conjugative transfer ATP/GTP-binding protein
29-21766..23631 [+], 1866321157331  [UniProt] Putative conjugative transfer membrane-associated protein
30-23633..23857 [+], 225321157332  [UniProt] Putative conjugative transfer protein
31-23874..24986 [+], 1113321157333  [UniProt] Cysteine/histidine-dependent peptidase
32-25000..25257 [+], 258321157334  [UniProt] Putative DNA binding conjugative transfer protein
33-25369..26634 [+], 1266321157335  [UniProt] Integrase
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins33Fasta
(1) Croucher NJ; Harris SR; Fraser C; Quail MA; Burton J; van der Linden M; McGee L; von Gottberg A; Song JH; Ko KS; Pichon B; Baker S; Parry CM; Lambertsen LM; Shahinas D; Pillai DR; Mitchell TJ; Dougan G; Tomasz A; Klugman KP; Parkhill J; Hanage WP; Bentley SD (2011). Rapid pneumococcal evolution in response to clinical interventions. Science. 331(6016):430-4. [PudMed:21273480] experimental
 
experimental experimental literature