ICEberg
ICEberg ID81
NameICESpnMalM6
FamilyTn916
OrganismStreptococcus pneumoniae Mal M6
Size (bp)23032
GC content [Genome] (%)38.5
Insertion site-
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceFR671413 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..23032
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESpnMalM6 form FR671413
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1orf231..315 [+], 315321157337  [UniProt] conjugative transposon protein
2orf22334..717 [+], 384321157338  [UniProt] conjugative transposon protein
3orf21746..2131 [+], 1386321157339  [UniProt] conjugative transposon FtsK/SpoIIIE-family protein
4orf202309..3514 [+], 1206321157340  [UniProt] putative conjugative transposon replication initiation factor
5orf193557..3778 [+], 222321157341  [UniProt] conjugative transposon protein
6orf183895..4392 [+], 498321157342  [UniProt] conjugative transposon protein
7orf174643..4873 [+], 231321157343  [UniProt] putative conjugative transposon membrane protein
8orf164857..7304 [+], 2448321157344  [UniProt] conjugative transposon ATP/GTP-binding protein
9orf157307..9484 [+], 2178321157345  [UniProt] conjugative transposon membrane protein
10orf149481..10482 [+], 1002321157346  [UniProt] putative cell wall hydrolaseVF
11orf1310497..11411 [+], 915321157347  [UniProt] putative conjugative transposon exported protein
12tetM11788..13707 [+], 1920321157348  [UniProt] conjugative transposon tetracycline resistance proteinAR
13-13919..14316 [+], 398321157349  [UniProt] UmuC/MucB-like protein
14-14313..14648 [+], 336321157350  [UniProt] ImsC-like protein
15-14730..15029 [+], 300321157351  [UniProt] YolD domain protein
16mel15433..16896 [-], 1464321157352  [UniProt] ABC transporter ATPase subunit
17mef17016..18233 [-], 1218321157353  [UniProt] Macrolide efflux transporterAR
18orf919562..19915 [-], 354321157354  [UniProt] putative conjugative transposon regulatory protein
19SPN23F1306120045..20191 [+], 147321157355  [UniProt] putative uncharacterized protein
20orf720420..20842 [+], 423321157356  [UniProt] putative conjugative transposon regulatory protein
21xis21530..21733 [+], 204321157357  [UniProt] excisionase
22int21815..23032 [+], 1218321157358  [UniProt] Integrase
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins22Fasta
(1) Croucher NJ; Harris SR; Fraser C; Quail MA; Burton J; van der Linden M; McGee L; von Gottberg A; Song JH; Ko KS; Pichon B; Baker S; Parry CM; Lambertsen LM; Shahinas D; Pillai DR; Mitchell TJ; Dougan G; Tomasz A; Klugman KP; Parkhill J; Hanage WP; Bentley SD (2011). Rapid pneumococcal evolution in response to clinical interventions. Science. 331(6016):430-4. [PudMed:21273480] experimental
 
experimental experimental literature