ICEberg
ICEberg ID82
NameICESpnH034800032
FamilyTn916
OrganismStreptococcus pneumoniae H034800032
Size (bp)20370
GC content [Genome] (%)38.5
Insertion site-
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceFR671414 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..20370
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESpnH034800032 form FR671414
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1orf231..315 [+], 315321157360  [UniProt] conjugative transposon protein
2orf22334..717 [+], 384321157361  [UniProt] conjugative transposon protein
3orf21746..2131 [+], 1386321157362  [UniProt] conjugative transposon FtsK/SpoIIIE-family protein
4orf202309..3727 [+], 1419321157363  [UniProt] putative conjugative transposon replication initiation factor
5ermB3984..4721 [+], 738321157364  [UniProt] rRNA methylaseAR
6-4978..6225 [-], 1248321157365  [UniProt] Transposase
7orf196405..6626 [+], 222321157366  [UniProt] conjugative transposon protein
8orf186743..7240 [+], 498321157367  [UniProt] conjugative transposon protein
9orf177491..7721 [+], 231321157368  [UniProt] putative conjugative transposon membrane protein
10orf167705..10152 [+], 2448321157369  [UniProt] conjugative transposon ATP/GTP-binding protein
11orf1510155..12332 [+], 2178321157370  [UniProt] conjugative transposon membrane protein
12orf1412329..13330 [+], 1002321157371  [UniProt] putative cell wall hydrolaseVF
13orf1313345..14259 [+], 915321157372  [UniProt] putative conjugative transposon exported protein
14tetM14636..16555 [+], 1920321157373  [UniProt] conjugative transposon tetracycline resistance proteinAR
15orf916901..17254 [-], 354321157374  [UniProt] putative conjugative transposon regulatory protein
16SPN23F1306117384..17530 [+], 147321157375  [UniProt] putative uncharacterized protein
17orf717759..18181 [+], 423321157376  [UniProt] putative conjugative transposon regulatory protein
18xis18869..19072 [+], 204321157377  [UniProt] excisionase
19int19154..20370 [+], 1217321157378  [UniProt] putative integrase (pseudogene)
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins19Fasta
(1) Croucher NJ; Harris SR; Fraser C; Quail MA; Burton J; van der Linden M; McGee L; von Gottberg A; Song JH; Ko KS; Pichon B; Baker S; Parry CM; Lambertsen LM; Shahinas D; Pillai DR; Mitchell TJ; Dougan G; Tomasz A; Klugman KP; Parkhill J; Hanage WP; Bentley SD (2011). Rapid pneumococcal evolution in response to clinical interventions. Science. 331(6016):430-4. [PudMed:21273480] experimental
 
experimental experimental literature