ICEberg ID86
OrganismStreptococcus pneumoniae 11928
Size (bp)22793
GC content [Genome] (%)38
Insertion site-
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceFR671417 (complete ICE sequence in this GenBank file)
Link to view genome context of this ICE in the genome browser
in_silico This is a predicted ICE derivied from literature.
Complete gene list of ICESpn11928 form FR671417
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1orf231..315 [+], 315321157427  [UniProt] conjugative transposon protein
2orf22331..717 [+], 387321157428  [UniProt] conjugative transposon protein
3orf21746..2131 [+], 1386321157429  [UniProt] conjugative transposon FtsK/SpoIIIE-family protein
4orf202309..3514 [+], 1206321157430  [UniProt] putative conjugative transposon replication initiation factor
5orf193557..3778 [+], 222321157431  [UniProt] conjugative transposon protein
6orf183895..4392 [+], 498321157432  [UniProt] conjugative transposon protein
7orf174367..4873 [+], 507321157433  [UniProt] putative conjugative transposon membrane protein
8orf164857..7304 [+], 2448321157434  [UniProt] conjugative transposon ATP/GTP-binding protein
9orf157307..9484 [+], 2178321157435  [UniProt] conjugative transposon membrane protein
10orf149481..10482 [+], 1002321157436  [UniProt] putative cell wall hydrolaseVF
11orf1310479..11411 [+], 933321157437  [UniProt] putative conjugative transposon exported protein
12tetM11773..13707 [+], 1935321157438  [UniProt] conjugative transposon tetracycline resistance proteinAR
13orf914053..19677 [-], 5625pseudogene putative conjugative transposon regulatory protein (pseudogene)
14ermB14814..15551 [+], 738321157439  [UniProt] rRNA methylaseAR
15tnpR15906..16460 [+], 555321157440  [UniProt] Resolvase
16-16464..19382 [+], 2919321157441  [UniProt] Transposase
17orf720182..20604 [+], 423321157442  [UniProt] putative conjugative transposon regulatory protein
18xis21292..21495 [+], 204321157443  [UniProt] excisionase
19int21577..22793 [+], 1217321157444 putative integrase (pseudogene)
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Croucher NJ; Harris SR; Fraser C; Quail MA; Burton J; van der Linden M; McGee L; von Gottberg A; Song JH; Ko KS; Pichon B; Baker S; Parry CM; Lambertsen LM; Shahinas D; Pillai DR; Mitchell TJ; Dougan G; Tomasz A; Klugman KP; Parkhill J; Hanage WP; Bentley SD (2011). Rapid pneumococcal evolution in response to clinical interventions. Science. 331(6016):430-4. [PudMed:21273480] experimental
experimental experimental literature