ICEberg
ICEberg ID92
NameTn1549
FamilyTn916
OrganismEnterococcus faecalis BM4382
Size (bp)33805
GC content [Genome] (%)52.8
Insertion site-
Function-
Species that ICE can be transferred toEnterococcus faecalis; Enterococcus faecium; Clostridium symbiosum
Nucleotide SequenceAF192329 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..33805
Link to view genome context of this ICE in the genome browser
experimental This is a ICE derived from experimental literature.
Complete gene list of Tn1549 form AF192329
#GeneCoordinates [+/-], size (bp)Protein GI Product *
1-252..1451 [+], 12008100656  [UniProt] unknown
2-1473..1685 [+], 2138100657  [UniProt] unknown
3-1760..2236 [+], 4778100658  [UniProt] unknown
4-2233..3927 [+], 16958100659  [UniProt] TrsK-like protein
5-4426..5289 [+], 8648100660  [UniProt] unknown
6-5320..5862 [+], 5438100661  [UniProt] MunI-like protein
7-5876..6298 [+], 4238100662  [UniProt] unknown
8-6228..8627 [+], 24008100663  [UniProt] TrsE-like protein
9-8659..10650 [+], 19928100664  [UniProt] unknownVF
10-10673..10924 [+], 2528100665  [UniProt] unknown
11-10914..12143 [+], 12308100666  [UniProt] bacteriocin-like protein
12-12140..14221 [+], 20828100667  [UniProt] DNA topoisomerase III-like protein
13-14370..18290 [+], 39218100668  [UniProt] LtrC-like protein
14-18291..19235 [+], 9458100669  [UniProt] unknown
15-19742..20188 [-], 4478100670  [UniProt] unknown
16-20529..21857 [-], 13298100671  [UniProt] Rlx-like protein
17-21818..22147 [-], 3308100672  [UniProt] unknown
18-22405..22776 [-], 3728100673  [UniProt] unknown
19vanRB24047..24709 [+], 6638100674  [UniProt] VanRBAR
20vanSB24709..26052 [+], 13448100675  [UniProt] VanSBAR
21vanYB26223..27029 [+], 8078100676  [UniProt] VanYBAR
22vanW27047..27874 [+], 8288100677  [UniProt] VanWAR
23vanHB27871..28842 [+], 9728100678  [UniProt] VanHBAR
24vanB28835..29863 [+], 10298100679  [UniProt] VanBAR
25vanXB29869..30477 [+], 6098100680  [UniProt] VanXBAR
26-31063..31494 [+], 4328100681  [UniProt] unknown
27-31501..31731 [+], 2318100682  [UniProt] unknown
28xis32148..32348 [+], 2018100683  [UniProt] excisionase
29int32432..33625 [+], 11948100684  [UniProt] integrase
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins29Fasta
(1) Foucault ML; Depardieu F; Courvalin P; Grillot-Courvalin C (2010). Inducible expression eliminates the fitness cost of vancomycin resistance in enterococci. Proc Natl Acad Sci U S A. 107(39):16964-9. [PudMed:20833818] experimental
(2) Tsvetkova K; Marvaud JC; Lambert T (2010). Analysis of the mobilization functions of the vancomycin resistance transposon Tn1549, a member of a new family of conjugative elements. J Bacteriol. 192(3):702-13. [PudMed:19966009] experimental
(3) Garnier F; Taourit S; Glaser P; Courvalin P; Galimand M (2000). Characterization of transposon Tn1549, conferring VanB-type resistance in Enterococcus spp. Microbiology. 146 ( Pt 6):1481-9. [PudMed:10846226] experimental
 
experimental experimental literature