STEP
MobilomeDB
The back-end database of VRprofile.

MobilomeDB had been built upon sets of publicly available databases of virulence and resistance genes, and chromosome-carrying mobilome genetic elements.
Remarkably, MobilomeDB had been organized on the single gene and gene cluster scale in order to support VRprofile-facilitated identification of homologous gene clusters based both on gene sequence and genomic context.
Last Update: Sept 7th, 2016

Gene cluster level Resource
35 Type III secretion system representatives T3DB
18 Type IV secretion systems representatives SecReT4
24 Type VI secretion systems representatives SecReT6
Type VII secretion system representatives This study
466 Integrative and conjugative elements ICEberg
322 HMM profiles for core component proteins of prophages Phage Finder, PHAST
Pathogenicity and Resistance island representatives PAIDB
Single gene level  
Virulence genes  
2454 Virulence Factors VFDB
271 Type III secretion effectors T3DB, T3SEdb
239 Type IV secretion effectors SecReT4
92 Type VI secretion effectors SecReT6
24 Type VII secretion effectors This study
Resistance genes  
Resistence Determiants  
ARDB ARDB
CARD CARD
BacMet BacMet
CBMAR CBMAR
ARG-ANNOT ARG-ANNOT
Others  
3411 Insertion sequence elements ISfinder
class I integron representatives INTEGRALL