SecReT4
Protein ID: 126698079
T4SS name [ID]Tra_Tn [668]
Gene symbol-
Locus tagCD630_05010
StrainClostridium difficile 630
Repliconchromosome [GenBank: NC_009089] [Browse all T4SS(s) in this replicon]
Location [Strand]590184..590576 [+]
Productconjugative transposon protein
Component typeOrf17_Tn
UniProt IDQ188U5
KEGG IDcdf:CD0501
PDB IDNA
Domain hit(s) vs Pfam TcpE [PF12648], Evalue: 1.4e-34, Aligned region: 6..107
Protein Sequence: 130 a.a.     [Download]
>gi|126698079|ref|YP_001086976.1| conjugative transposon protein [Clostridium difficile 630]
MKKIRSYTSIWSVEKVLYSINDFRLPFPITFTQMTWFVVSLFAVMILGNVPPLSMIEGAFLKYFGIPVAF
TWFMSTKTFDGKKPYGFLKSVIAYALRPKLTYAGKKVTLGRNQPQEAITAVRSEFYGISN
 
Nucleotide Sequence: 393 bp     [Download]
>gi|126697566|ref|NC_009089.1|:590184-590576 Clostridium difficile 630, complete genome
ATGAAGAAAATACGAAGCTATACCAGTATTTGGTCTGTTGAGAAAGTGCTGTACTCCATAAACGATTTTA
GACTTCCGTTTCCCATAACCTTTACGCAAATGACGTGGTTTGTCGTGTCACTGTTTGCGGTTATGATACT
TGGCAACGTGCCACCTCTTTCCATGATTGAGGGAGCATTTCTCAAATACTTTGGGATTCCTGTCGCTTTC
ACATGGTTTATGTCTACAAAAACCTTTGATGGTAAAAAGCCTTATGGATTTTTAAAGTCTGTCATTGCTT
ATGCACTGCGACCAAAGCTGACCTATGCAGGGAAAAAAGTAACCCTTGGCAGAAATCAGCCACAAGAAGC
CATTACAGCAGTTAGGAGTGAATTTTATGGCATATCCAATTAA
 Primer design