SecReT4
Protein ID: 126701004
T4SS name [ID]Tra_Tn [670]
Gene symbol-
Locus tagCD630_33830
StrainClostridium difficile 630
Repliconchromosome [GenBank: NC_009089] [Browse all T4SS(s) in this replicon]
Location [Strand]3954969..3957419 [-]
ProductATPase
Component typeOrf16_Tn
UniProt IDQ180M9
KEGG IDcdf:CD3383
PDB IDNA
Domain hit(s) vs Pfam AAA_10 [PF12846], Evalue: 3.9e-34, Aligned region: 467..762
Protein Sequence: 816 a.a.     [Download]
>gi|126701004|ref|YP_001089901.1| ATPase [Clostridium difficile 630]
MFPIKYIDNNLVWNKDNEVFAYYELIPYNYSFLSTEQKFIVHDSFRQLIAQSREGKIHALQIATESSIRS
MQEQSKKLVTGKLREVAVQKIDEQTEALVSMIGDNQVDYRFFLGFKLMVTEEQLNLKNIKKSAWLTFKEF
LHEVNHTLMNDFVSMPNDEINRYMKMEKLLENKISRRFKVRRLEINDFGYLMEHLYGRDGVAYEDYEYQL
PKKKYKKETLIKYYDLIRPTRCVIEESQRYLRLEHEDKESYVSYFTVNAIVGELDFPSSEIFYFQQQQFT
FPVDTSMNVEIVENRKALTTVRNKKKELKDLDNHAYQAGSETSSNVVDALDSVDELETDLDQTKESMYKL
SYVIRVCADDLDELKRRCDEVKDFYDDLNVKLVRPAGDMLGLHSEFLPASRRYINDYVQYVKSDFLAGLG
FGATQQLGETTGIYIGYSVDTGRNVYLQPSLASQGVKGTVTNALASAFVGSLGGGKSFCNNLLVYYAVLF
GGQAVILDPKAERGNWKETLPEIANEINIVNLTSDKDNAGLLDPFVIMKNVKDAESLAIDILTFLTGISS
RDGEKFPVLRKAVRSVTQSETRGLLHVIEELRKEDTAISRNIADHIDSFTDYDFAHLLFSDGTVENAISL
DNQLNIIQVADLVLPDKDTTFEEYTTIELLSVSMLIVISTFALDFIHSDRSIFKIVDLDEAWAFLNVAQG
ETLSNKLVRAGRAMQAGVYFVTQSAYDVSKESLKNNIGLKFAFRSTDINEIKQTLEFFGIDKDDENNQKR
LRDLENGQCLLQDLYGRVGVVQIHPVFEELLHAFDTRPPVQRNEVE
 
Nucleotide Sequence: 2451 bp     [Download]
>gi|126697566|ref|NC_009089.1|:c3957419-3954969 Clostridium difficile 630, complete genome
ATGTTCCCGATAAAATATATTGACAACAACCTTGTCTGGAACAAGGACAATGAGGTGTTCGCTTACTATG
AGCTGATACCGTACAACTATTCTTTCTTATCCACAGAGCAGAAATTTATCGTGCATGACAGTTTCCGACA
GCTTATCGCACAGTCCCGTGAGGGTAAAATTCATGCGTTGCAGATTGCGACGGAAAGCTCAATTAGAAGT
ATGCAGGAACAGTCAAAGAAGCTGGTTACGGGGAAACTTCGTGAGGTGGCAGTCCAGAAGATAGACGAAC
AGACCGAAGCGTTAGTATCTATGATTGGGGACAATCAAGTGGACTACCGCTTTTTTCTTGGCTTTAAGCT
CATGGTTACGGAAGAACAGCTCAATCTGAAGAACATCAAAAAATCGGCGTGGCTGACGTTCAAGGAATTT
CTCCATGAAGTGAACCACACGTTGATGAACGACTTTGTTTCCATGCCGAATGATGAAATTAACCGTTACA
TGAAAATGGAAAAGTTACTGGAAAATAAAATCTCCCGTCGCTTTAAGGTGCGTCGCTTGGAAATCAATGA
TTTTGGGTATCTCATGGAACATCTTTACGGCAGGGACGGTGTCGCTTATGAAGATTATGAGTACCAGTTA
CCAAAAAAGAAATACAAGAAAGAAACGCTGATAAAATATTACGACCTTATCCGTCCGACAAGATGTGTGA
TTGAGGAAAGCCAGCGGTATTTACGCTTGGAACATGAGGACAAGGAAAGCTATGTGTCTTACTTTACCGT
CAATGCGATTGTTGGGGAGCTTGATTTTCCGTCAAGTGAAATATTCTACTTCCAGCAACAGCAATTTACC
TTTCCCGTTGATACGAGCATGAATGTAGAAATCGTGGAAAACCGAAAAGCATTAACGACAGTCCGCAACA
AGAAAAAGGAATTGAAAGATTTGGATAATCACGCCTATCAAGCTGGAAGTGAAACCAGCTCAAATGTGGT
GGACGCATTAGACAGCGTGGACGAGCTGGAAACCGATTTAGACCAGACAAAAGAAAGTATGTATAAGCTC
TCTTATGTTATCCGTGTCTGTGCTGATGATTTGGACGAATTAAAACGCCGTTGTGATGAAGTAAAGGACT
TTTACGACGACCTCAATGTAAAGCTGGTACGTCCTGCTGGGGATATGCTGGGGCTTCACTCTGAATTTCT
TCCTGCCAGCAGGCGATATATCAATGATTATGTGCAGTATGTAAAATCAGACTTCTTGGCTGGGCTTGGC
TTTGGAGCGACACAGCAGTTAGGGGAAACTACGGGTATCTATATCGGCTATTCCGTTGATACGGGAAGAA
ATGTGTACCTGCAACCGTCTTTAGCTTCGCAGGGCGTAAAGGGGACAGTTACCAATGCTTTAGCTTCTGC
CTTTGTCGGAAGTCTTGGCGGTGGAAAGTCGTTCTGCAACAATCTTCTGGTGTATTATGCGGTGCTGTTT
GGCGGTCAAGCAGTCATTTTAGACCCCAAAGCCGAGAGAGGCAACTGGAAAGAAACGCTCCCAGAAATCG
CCAATGAAATCAATATCGTAAACCTGACCAGCGACAAGGACAATGCAGGACTTCTTGACCCATTCGTGAT
TATGAAGAATGTCAAAGACGCTGAAAGTCTGGCAATCGACATCTTGACATTCCTTACGGGTATTTCCTCT
AGGGACGGCGAAAAATTCCCCGTACTTCGTAAGGCGGTGCGTTCCGTTACCCAGAGTGAAACAAGGGGCT
TGCTTCATGTGATAGAGGAACTTAGAAAAGAAGATACCGCAATCTCACGCAATATCGCAGACCATATCGA
CAGCTTCACGGACTATGATTTTGCACATCTGCTGTTTTCAGACGGTACGGTGGAAAATGCTATCAGTCTG
GATAACCAGCTCAATATCATTCAAGTAGCGGACTTAGTATTACCAGATAAAGATACCACTTTTGAGGAAT
ACACGACCATTGAATTGTTGTCGGTGTCTATGCTGATTGTGATTAGTACCTTTGCCCTTGATTTTATCCA
TTCGGACAGAAGCATTTTTAAGATTGTCGATTTGGACGAAGCGTGGGCGTTCTTAAATGTGGCACAAGGT
GAAACGCTTTCTAATAAACTGGTTCGTGCTGGACGAGCTATGCAGGCAGGCGTATATTTTGTTACCCAGT
CTGCCTATGATGTGTCAAAAGAAAGTCTGAAAAACAATATCGGTTTGAAATTCGCTTTCCGTTCTACTGA
TATTAACGAGATAAAGCAGACCTTAGAATTTTTCGGTATCGACAAGGACGACGAGAACAACCAGAAACGC
TTGCGTGATTTGGAGAACGGACAATGTTTGTTGCAGGACTTATACGGGCGTGTCGGTGTGGTGCAGATAC
ACCCAGTCTTTGAAGAATTACTACACGCCTTTGATACCAGACCGCCCGTACAGAGAAATGAGGTGGAGTG
A
 Primer design