| Protein ID: 187729903 |
 T4SS name [ID] | Tra_F [522] |
| Gene symbol | traI |
| Locus tag | pVT1_p21 |
| Strain | Vibrio tapetis plasmid pVT1 (NC_010614) |
| Replicon | plasmid pVT1 [GenBank: NC_010614] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 29174..34951 [+] |
| Product | putative conjugative transfer protein TraI |
| Component type | TraI_F |
| UniProt ID | B2LS81 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwC [PF08751], Evalue: 1.8e-79, Aligned region: 7..313 AAA_30 [PF13604], Evalue: 3.8e-53, Aligned region: 471..570 AAA_30 [PF13604], Evalue: 3.8e-53, Aligned region: 1015..1209 Toprim_3 [PF13362], Evalue: 6.8e-10, Aligned region: 1760..1847 AAA_19 [PF13245], Evalue: 1.2e-06, Aligned region: 1029..1097 |
| Protein Sequence: 1925 a.a. [Download] |
| >gi|187729903|ref|YP_001853797.1| putative conjugative transfer protein TraI [Vibrio tapetis] MLSISPLKSASGAAKYYLSEENPKDSPDLSLEKDAGDNYYLKEKDQEENTFWHGKLAIEAGLAGKAVDQP TLESVLSGNLGDETIKGKRENHKSGFDLTFSAPKTISVLALVGGDARLIEAHNNAVKFALTELEKDVAQV KVTHEKGIQEYENTDSMLFAVVRHKTSRENDPQVHSHALAANMTRDQEGDLRALSTSLKQKGGVINGTGE RIYNFQKYYGILYQSQLAKDVQALGYSTRGVGNGQFEVSGVPQPIIEASSTRKQQIDQRTLDLGFDSRAA KDVANLDTRKSKTYQSHESLNNQWQTKVRSQGYEPSELVGMAQQAKTSQDGITPDDTKAAIHRAIDHLGQ YSTALHLEKIIELAASDFTKGGVQANAIELKTILDQQIKEGALIPLADKGQYTTQTLIDNEHSLMKSTQG RAHHMRTHVDPSLLHRLDIPANQQQKLTDLFQSTKQFHVVNVHGSSQGIAQQLLNVGNHSGKRVQFVSQT AKAKSEGVENIQRHSHTLGAWIAHHFSSEQRHTTQSLLQGATPFTNKDILLIDDANKMSAKELMSLTNQA KQSNTKVVMLNRVSSRQGFKANNAIELYRKGNVERHTWVGGKSAPTDIKLHDNDTDRIARVYADLPDKAN TQVIATSGVEQRRLTEAIRGQLKNTGALSRHETTLFTQTPHSLSKAQQPLVQHYKPGMTLTHWEKNKPQS FVIASIDKESNTMTALSKRDGQSHRFDPSSRAFKKMKMQINKPQSLNIAQGERLRTLGKHFPSGLEGNQS YLVTHINKESLMLESKGKTQRLSLESLKDAPLQYDYVHGANHIEQKAHTLLSGKTFTLSKPLINDLTEKT ARLDVFTDKPNKAQSALEKEQVSPSAIERVLHTQNVNDRYLSGATQALLTQDVSQALSTLAKAQNAPLIE KAVSFALNHLSEREAGFSQKALVVEAVRYAFEEAGGAITKDQIDTELAKRRDTLSAEYSDGTRWTTHAAL ETEKRILQNITDGKGQHPPFAITKQVQAFLETQPRLTQGQQGSLTLISTTQDSFVAIQGLAGTGKSTMLE SNIELIQLAKQVSQQPEQNVIGLAPTHAAVSELESKGVKAQTLESLLSDIRQGNRQASDYQGTLFFLDES SMVSNKQADEFTTLVNASQSKAVLLGDKEQLLSLSAGKPFELAMRQGRLDTAYMTDIIRQQNDPLLNAAQ NTIDKQPESALDKLQRQSPDAQGNHQHVISTLDENNQDRRQAQLEATEKLPYLVAKDYLERTPETRENTL IIAYTNQERDDITAYVRVGLMKNEEIGKENIVATRLRSIGATGEELTTMMPYQKGLVLSTKPGEYATITH VDSEHGVVTLEDASTGKTKPFLPRNRDHRFTTLFSVSEKPLSTGDKIVTRFTDKSRDIKANVEYRITQAS PDSIMAQSKSGQTLTINPNELTDSHWDYAYSRTADMAQGATYPHVITAIKSKGALTNLRRAGIDVTRASQ HVRLYTDNTTHLLKSWLSKESHKASAIETANQTPPQDTTYFNRNALPHEDVRFQNKSGDFDYNTFKEHIN TQLPKYTESLAMHLLGKPNQSKSDRDYLTFGIGKSAIKVTLTGEHRGYFKDYTTGEKGSLINLIMSHKDM GYKEAMTEANNLLNEPDKYQLEENSKHDKLLNTTPKHIAQFEERAKEYISQSKPIENTLAQTYLNKLGVN HTHNDQVKFHPAVYSSEDKLFHPAMVTNIHNKQGETKAVEVTYLDHQGNKDDALDINPRTLGTKSKQLTT FHQGEHVNTTLISTSIENSFLIREHTQGQMDIINVNHKNDIQNIPTDELRQNVIIVLNQGNHDVNPNNIE KIVENFNGRDVQFMSDDHLKEDIKTCIDKLDRDNRAHDIELSEPHPTHQERELDTLNMDEKKERDSQSLE HFETKAPSPQHEMDFNHPEKESDWENREIDRELER |
| Nucleotide Sequence: 5778 bp [Download] |
| >gi|187729868|ref|NC_010614.1|:29174-34951 Vibrio tapetis plasmid pVT1, complete sequence ATGCTTTCTATTAGCCCATTAAAATCCGCCTCTGGCGCCGCCAAATATTACCTTAGCGAAGAAAACCCAA AAGACTCACCGGATCTCTCGTTAGAAAAAGACGCCGGTGACAATTACTACCTCAAAGAAAAAGACCAAGA GGAGAACACCTTTTGGCATGGCAAGCTCGCCATCGAAGCGGGACTGGCAGGCAAAGCCGTAGACCAACCG ACCTTAGAATCGGTACTCTCAGGCAACCTAGGCGATGAAACCATTAAAGGGAAACGGGAAAATCACAAAT CAGGCTTCGATCTGACCTTTTCGGCTCCTAAAACCATCAGCGTTCTTGCGCTTGTTGGAGGAGATGCCCG TCTCATTGAAGCGCATAACAACGCCGTCAAATTTGCTTTAACAGAGCTTGAAAAAGACGTGGCACAAGTC AAAGTCACTCATGAAAAAGGGATCCAAGAATACGAAAATACGGATTCGATGCTATTTGCGGTCGTGCGCC ATAAGACCAGCCGTGAAAATGACCCACAAGTCCACTCTCACGCTCTAGCGGCAAACATGACGCGAGACCA AGAAGGTGATTTACGGGCTTTATCAACCAGCCTAAAACAAAAAGGCGGTGTCATTAACGGCACAGGCGAA CGCATTTACAACTTCCAAAAATACTACGGTATCTTATACCAAAGCCAGCTTGCTAAAGACGTACAAGCCC TTGGTTATTCCACGCGAGGCGTCGGTAACGGTCAGTTCGAAGTCAGCGGTGTCCCTCAACCCATTATTGA AGCCTCATCGACTCGCAAACAGCAAATTGACCAACGCACCCTAGACTTAGGCTTTGATTCACGCGCGGCA AAAGACGTCGCCAACCTCGATACACGTAAAAGCAAAACCTACCAGAGTCATGAAAGCCTCAATAATCAAT GGCAAACTAAAGTACGCTCGCAAGGCTATGAGCCGTCTGAGTTAGTGGGAATGGCGCAGCAAGCCAAGAC ATCACAAGATGGGATTACGCCAGATGATACGAAAGCTGCCATTCATAGAGCCATTGACCATTTGGGTCAA TACAGCACCGCATTACACCTAGAAAAAATCATTGAACTTGCCGCGTCTGATTTTACCAAAGGAGGCGTTC AAGCCAATGCGATTGAGCTTAAAACCATCCTAGACCAACAGATAAAAGAGGGCGCGCTTATTCCTTTAGC CGATAAAGGGCAATACACCACCCAAACCCTGATTGATAATGAGCACTCACTCATGAAAAGCACCCAAGGA CGGGCGCACCACATGCGCACCCACGTTGACCCCTCGCTCTTACATCGCCTTGATATTCCAGCCAACCAGC AACAAAAGCTCACCGACCTATTTCAGTCCACCAAGCAGTTTCATGTCGTCAATGTGCATGGCTCATCACA AGGCATCGCGCAGCAACTGCTTAATGTCGGCAACCACAGCGGCAAACGGGTTCAGTTCGTCTCCCAAACC GCCAAAGCCAAATCAGAAGGCGTGGAAAATATTCAGCGCCACAGCCACACCTTAGGCGCCTGGATAGCCC ATCATTTTTCATCGGAGCAGCGCCACACTACCCAAAGCTTGCTCCAGGGCGCAACGCCGTTCACCAACAA AGACATCTTGCTCATCGACGACGCCAATAAGATGAGCGCTAAGGAGCTGATGAGTCTCACCAACCAAGCC AAGCAATCCAACACCAAGGTGGTGATGCTGAACCGCGTCTCCAGTCGTCAAGGCTTTAAAGCCAACAACG CCATTGAACTGTACCGCAAAGGCAACGTAGAGCGTCATACGTGGGTGGGTGGGAAAAGCGCCCCCACCGA CATCAAACTGCATGACAACGACACCGATAGAATAGCAAGGGTCTACGCTGACTTACCGGACAAAGCCAAC ACTCAAGTGATTGCCACCTCCGGCGTCGAGCAGCGGCGGTTAACCGAAGCGATACGAGGGCAGTTAAAAA ACACCGGCGCCCTCTCTCGTCATGAAACCACCCTATTCACTCAAACCCCTCACTCTCTCTCCAAAGCGCA GCAACCACTTGTCCAACACTACAAACCCGGCATGACCCTCACCCATTGGGAGAAAAACAAACCCCAAAGT TTTGTCATTGCCAGTATCGACAAAGAGAGCAACACCATGACCGCACTCAGCAAACGCGATGGACAGTCAC ACCGCTTTGACCCGTCCAGTCGCGCCTTTAAGAAGATGAAGATGCAAATCAATAAACCGCAAAGTCTCAA CATCGCCCAAGGCGAACGCCTTCGCACGCTGGGTAAGCACTTTCCTTCTGGCTTAGAGGGCAACCAAAGT TACCTTGTCACACACATTAACAAAGAAAGCCTCATGCTTGAGAGCAAAGGTAAAACGCAGCGCCTAAGTT TAGAGAGTCTAAAAGACGCACCATTGCAATACGATTACGTTCACGGCGCCAACCATATTGAGCAAAAAGC CCATACCTTGTTATCAGGAAAAACCTTTACTCTGTCTAAACCGCTGATAAACGACCTGACCGAAAAAACA GCGCGCCTGGATGTCTTCACCGACAAGCCAAACAAAGCCCAAAGCGCCCTAGAAAAAGAGCAGGTCTCCC CGTCAGCCATTGAGCGCGTCTTGCACACGCAAAACGTCAACGACCGCTACCTAAGCGGCGCCACCCAAGC CTTGTTAACGCAAGACGTCAGTCAGGCGCTTTCGACCCTGGCAAAAGCGCAAAACGCCCCACTGATTGAA AAAGCGGTCAGCTTTGCCTTAAACCATTTATCTGAGCGTGAAGCGGGGTTTAGCCAAAAAGCGTTAGTGG TGGAGGCGGTACGTTACGCCTTTGAAGAAGCCGGCGGCGCTATTACCAAAGACCAGATTGACACGGAGCT TGCCAAGCGCCGTGACACCCTTTCCGCGGAGTACAGTGACGGCACACGCTGGACAACACACGCGGCGCTG GAGACTGAAAAACGCATCTTGCAAAACATCACTGATGGCAAGGGCCAACATCCGCCTTTTGCGATAACCA AGCAGGTGCAAGCCTTTCTTGAGACCCAGCCTCGCCTCACTCAAGGACAACAAGGCAGCCTTACCCTGAT TTCAACCACCCAAGACAGCTTTGTCGCCATTCAAGGCTTAGCCGGTACAGGGAAATCCACCATGCTTGAA TCCAACATTGAACTTATCCAATTAGCGAAACAAGTCAGCCAACAACCCGAGCAAAACGTCATTGGCCTTG CGCCCACCCACGCCGCCGTTTCTGAGCTGGAAAGCAAGGGCGTGAAAGCGCAAACCCTAGAGAGCCTACT CAGTGACATCCGACAAGGCAACCGCCAAGCCAGCGACTATCAAGGCACTTTGTTCTTTCTCGATGAAAGC TCCATGGTCAGTAACAAACAAGCCGATGAATTCACCACGCTGGTCAATGCCAGTCAATCCAAAGCCGTGT TGTTAGGGGATAAAGAGCAGTTGTTATCTTTAAGCGCCGGTAAACCCTTTGAGCTGGCCATGCGTCAAGG TCGCCTCGATACCGCTTACATGACCGACATCATTCGTCAGCAAAACGACCCCCTACTCAATGCCGCGCAA AACACCATTGATAAGCAGCCCGAAAGCGCCTTGGACAAACTCCAACGCCAATCGCCTGACGCGCAAGGCA ATCACCAACATGTCATCTCCACGCTGGATGAAAACAATCAAGACCGACGCCAAGCGCAGTTAGAAGCCAC TGAAAAGCTGCCCTACCTGGTAGCAAAGGATTACCTAGAACGCACACCTGAAACCCGCGAAAACACGCTT ATCATCGCCTACACCAACCAAGAGCGTGATGACATCACGGCCTACGTTCGTGTTGGCTTAATGAAAAACG AGGAAATCGGCAAAGAGAACATTGTCGCCACGAGATTGCGCTCCATCGGCGCCACCGGTGAAGAGCTCAC CACCATGATGCCGTATCAAAAAGGCTTAGTGCTGAGCACCAAGCCCGGTGAGTACGCCACCATTACCCAC GTGGATTCGGAGCACGGTGTGGTGACGCTTGAAGACGCCAGCACAGGCAAGACAAAGCCGTTCTTACCGC GTAACCGTGACCATCGTTTCACGACGCTTTTCTCTGTATCAGAAAAACCACTCTCAACAGGCGATAAGAT TGTCACTCGCTTTACCGATAAAAGCCGCGACATCAAAGCCAATGTGGAGTACCGCATCACCCAAGCAAGC CCGGATAGCATCATGGCGCAATCAAAAAGTGGCCAAACGCTCACCATCAACCCGAATGAGTTAACAGACA GTCATTGGGATTACGCTTACAGCCGAACCGCGGACATGGCGCAAGGGGCCACGTACCCGCACGTCATTAC GGCCATCAAAAGCAAAGGCGCATTAACCAACCTAAGACGTGCCGGCATTGATGTCACCCGCGCCAGCCAG CACGTGAGGCTCTATACCGATAACACCACACACCTGCTCAAAAGCTGGTTATCCAAAGAAAGCCATAAAG CTAGCGCGATAGAAACCGCCAACCAAACCCCACCCCAAGACACCACTTACTTTAACCGCAACGCCCTGCC CCATGAGGACGTTCGCTTCCAAAATAAAAGCGGTGACTTTGACTACAACACCTTTAAGGAGCACATCAAT ACACAACTCCCGAAATACACCGAAAGCCTAGCCATGCACTTATTAGGCAAGCCCAACCAGTCCAAATCCG ACCGCGACTATTTAACCTTTGGCATTGGCAAATCCGCCATTAAAGTGACCTTAACAGGCGAGCATCGTGG TTATTTTAAAGACTACACCACGGGCGAGAAAGGCTCGCTGATTAACCTCATCATGAGCCACAAAGACATG GGCTATAAAGAGGCCATGACGGAAGCCAATAACCTGTTAAATGAGCCAGATAAATATCAACTGGAGGAAA ACAGCAAACATGACAAATTACTCAACACCACGCCAAAGCATATTGCGCAATTTGAAGAAAGAGCCAAAGA ATACATCAGTCAAAGTAAACCGATAGAGAACACACTGGCCCAAACTTACTTAAACAAGCTAGGGGTAAAT CACACCCACAATGACCAAGTTAAATTCCACCCGGCAGTCTACTCGTCCGAAGACAAACTCTTCCATCCGG CCATGGTTACCAATATTCACAACAAACAAGGCGAAACCAAAGCCGTTGAAGTGACCTACCTTGACCATCA GGGAAATAAAGACGATGCCTTAGACATTAACCCAAGGACGCTGGGGACAAAATCCAAACAATTAACGACC TTCCATCAAGGGGAGCATGTAAACACCACCCTCATCAGCACGTCGATTGAAAACTCGTTTTTAATACGCG AGCACACTCAAGGCCAAATGGACATTATTAACGTCAACCACAAGAACGACATTCAAAATATACCCACGGA TGAATTAAGACAGAATGTCATTATTGTCTTAAACCAAGGCAACCACGATGTAAACCCGAACAACATCGAG AAGATTGTTGAGAATTTTAATGGTCGAGACGTTCAATTCATGTCAGACGATCATTTAAAGGAGGACATTA AAACCTGCATAGATAAATTAGACCGCGATAACCGCGCGCATGATATCGAATTAAGCGAACCCCATCCCAC TCATCAAGAAAGAGAATTAGACACACTGAACATGGATGAGAAAAAAGAACGGGACAGTCAATCCCTTGAA CACTTTGAAACCAAAGCGCCGTCACCTCAACACGAGATGGATTTTAATCATCCAGAGAAAGAGAGCGATT GGGAAAACAGAGAAATAGACAGAGAGTTAGAGAGATAA |
 Primer design |