SecReT4
Protein ID: 56416922
T4SS name [ID]VirB [496]
Gene symbolvirB4
Locus tagAM814
StrainAnaplasma marginale str. St. Maries
Repliconchromosome [GenBank: NC_004842] [Browse all T4SS(s) in this replicon]
Location [Strand]749731..752139 [-]
Producttype IV secretion system ATPase VirB4
Component typeVirB4
UniProt IDQ5PAD9
KEGG IDama:AM814
PDB IDNA
Domain hit(s) vs Pfam CagE_TrbE_VirB [PF03135], Evalue: 9e-59, Aligned region: 193..396
AAA_10 [PF12846], Evalue: 2.1e-34, Aligned region: 449..726
Protein Sequence: 802 a.a.     [Download]
>gi|56416922|ref|YP_153996.1| type IV secretion system ATPase VirB4 [Anaplasma marginale str. St. Maries]
MLRLGRTAATTKKRGVVERECHEAHFLPYLEHWNSTTLITKDGCMLKVIKLSGYAFETADDEDLSIQNSI
RNQTLRSMSSSSFGLYFHIIRRRKDAFSHGFARGKLSNAFADAVNVQWREKHMTKPSFANELYITVVRDG
GKKSTELFVNLMKKFSKKVTSEAWKNDMRAIYEDLEEATNRVVTSLRNYAPRELGIRQTPSGDFSEIMEF
LLQIVNCGTVHNVAMHLGDISRHLPMHRLYFGHKVVQVVGHDESKYAGLISLKEYGQTTSAGMLDAFLQL
PYEFIITQSFKFTNRQAAITKMQIQQNRMIQSADKAVSQIYEISKALDDATSGKIAFGLHHLTVLCIEKN
PKNLENALSLVEAELSNCGVYPVREKVNLEPAFWAQLPGNFSYVVRKAVISTLNMAGFASQHNYPIGKKF
DNHWGEAVTVFDTTSGTPFFFSFHIRDVGHTAIIGPTGGGKTVLMNFLCVQAMKFSPRIFFFDKDHGAEI
FIRALNGIYSVVEPRGNTGLNPLHLDDTTENRTFLMEWMKVLATTLSSDLTPDDILRINDAIEGNFKLRK
EDRMLRNLVPFLGIGGADTLAGRMMMWHSEGSHAALFDNEEDLLDFTKSRVFGFEMGNLLKDPAALAPTL
LYLFHKISISLDGTPSIIILDEAWALIDNPVFAPRIKDWLKVLRKLNTFVIFATQSVEDASKSQISDTLV
QQTATQIFLPNLKATSAYRDVFMLTEREYSLIKYTDPGSRFFLVKQGVSAVVARIDLRGLEDTINVLSGR
AETVLMLNEIIEKVGRDPNVWLPIFCQKVRNA
 
Nucleotide Sequence: 2409 bp     [Download]
>gi|56416370|ref|NC_004842.2|:c752139-749731 Anaplasma marginale str. St. Maries chromosome, complete genome
ATGTTGAGACTCGGGAGAACTGCAGCAACTACTAAGAAGAGGGGGGTTGTTGAGAGGGAATGCCACGAGG
CCCATTTTCTGCCTTACTTGGAACACTGGAATAGCACAACCCTTATAACCAAAGATGGTTGCATGCTGAA
GGTTATCAAGCTGTCTGGCTACGCGTTTGAAACCGCGGATGATGAGGATTTATCTATACAAAACTCTATC
AGAAACCAGACGCTCCGTAGCATGTCCTCATCTTCGTTTGGTCTATACTTTCACATCATAAGACGCAGGA
AAGACGCGTTCTCTCATGGTTTTGCAAGAGGCAAGCTATCTAACGCCTTTGCTGATGCTGTGAATGTCCA
GTGGCGCGAAAAACACATGACGAAGCCGTCATTTGCAAACGAGCTATACATAACGGTCGTCAGGGATGGG
GGTAAGAAAAGCACCGAGCTGTTTGTGAACTTAATGAAAAAGTTCAGCAAGAAGGTGACCAGCGAAGCCT
GGAAGAATGACATGCGTGCCATCTATGAGGACTTAGAAGAGGCGACAAACCGGGTGGTGACCAGCCTCCG
TAACTATGCGCCCAGGGAGCTTGGTATCAGGCAAACGCCCTCGGGGGACTTTTCGGAGATTATGGAGTTT
TTGCTCCAAATTGTAAATTGCGGCACGGTGCACAATGTTGCTATGCACCTCGGAGATATTTCCCGGCACT
TGCCCATGCACAGATTGTATTTTGGCCACAAAGTGGTGCAAGTTGTTGGGCATGATGAGTCAAAATATGC
GGGGCTGATAAGCTTAAAAGAATACGGCCAAACCACTTCTGCCGGAATGTTAGATGCGTTTTTGCAACTG
CCATACGAGTTTATTATCACGCAGTCTTTTAAGTTTACGAACAGACAAGCCGCAATAACCAAGATGCAGA
TTCAGCAAAATCGCATGATTCAATCTGCCGACAAGGCGGTTTCGCAGATCTACGAGATCTCCAAGGCGCT
GGATGATGCGACAAGCGGTAAGATCGCGTTTGGGCTCCATCACCTGACGGTTTTGTGTATCGAAAAAAAC
CCGAAAAACCTGGAAAACGCACTATCTCTTGTGGAGGCTGAGCTCTCTAACTGTGGGGTATATCCTGTCA
GAGAGAAAGTAAATCTGGAGCCCGCATTTTGGGCTCAACTTCCGGGCAACTTTTCATATGTTGTGCGGAA
AGCGGTGATTAGTACGCTGAATATGGCTGGTTTCGCGTCCCAGCACAACTACCCCATCGGCAAAAAGTTT
GATAACCACTGGGGGGAGGCGGTCACGGTTTTTGACACCACATCTGGTACTCCGTTCTTCTTCAGTTTCC
ACATACGTGACGTTGGCCATACGGCAATAATAGGCCCAACTGGGGGTGGTAAAACAGTGCTGATGAACTT
TCTGTGTGTTCAGGCAATGAAATTCTCTCCCAGGATTTTCTTTTTCGATAAAGACCACGGTGCGGAAATC
TTCATCAGAGCCCTAAATGGCATCTATTCAGTTGTAGAGCCCAGGGGCAATACCGGGTTGAATCCGCTAC
ACTTAGACGATACGACCGAGAACAGAACGTTTCTCATGGAATGGATGAAAGTGCTGGCGACCACGCTCTC
GAGCGACCTAACTCCAGATGACATACTGCGCATAAATGATGCCATAGAAGGCAATTTTAAGCTCAGGAAG
GAAGACAGGATGTTGCGCAATCTTGTGCCTTTTTTGGGTATAGGGGGTGCAGATACCCTAGCTGGGCGCA
TGATGATGTGGCATTCCGAAGGTTCACATGCGGCACTTTTTGATAATGAAGAGGACCTACTAGATTTTAC
TAAGTCCAGGGTCTTTGGGTTTGAGATGGGAAATTTGCTCAAGGATCCGGCGGCCCTCGCCCCTACTTTG
TTGTATTTATTCCACAAGATTAGCATATCGCTCGACGGTACGCCCTCGATAATAATCTTGGATGAAGCGT
GGGCGCTGATTGATAACCCCGTGTTTGCGCCCAGAATAAAAGACTGGCTGAAAGTACTAAGAAAGCTCAA
CACCTTTGTGATATTCGCTACACAAAGTGTTGAAGATGCAAGTAAAAGTCAGATCAGCGATACATTAGTG
CAACAAACAGCAACGCAGATCTTTTTACCCAACCTTAAGGCTACCAGTGCATATAGGGATGTATTCATGT
TAACTGAGAGAGAGTACTCCCTGATAAAATACACAGATCCTGGGAGTAGGTTCTTTCTGGTAAAGCAGGG
TGTCAGCGCCGTGGTCGCGAGGATAGACCTTAGGGGTTTGGAAGACACCATAAATGTTCTATCAGGGAGG
GCGGAGACAGTACTGATGTTGAACGAGATAATAGAAAAAGTTGGTCGTGACCCGAACGTGTGGCTGCCAA
TTTTCTGCCAGAAGGTTAGAAATGCGTAG
 Primer design

Protein ID: 56417100
T4SS name [ID]VirB [496]
Gene symbolvirB4
Locus tagAM1053
StrainAnaplasma marginale str. St. Maries
Repliconchromosome [GenBank: NC_004842] [Browse all T4SS(s) in this replicon]
Location [Strand]956209..958638 [-]
ProductVirB4 protein
Component typeVirB4
UniProt IDQ5P9W1
KEGG IDama:AM1053
PDB IDNA
Domain hit(s) vs Pfam CagE_TrbE_VirB [PF03135], Evalue: 3.7e-23, Aligned region: 209..406
AAA_10 [PF12846], Evalue: 4.5e-09, Aligned region: 463..719
Protein Sequence: 809 a.a.     [Download]
>gi|56417100|ref|YP_154174.1| VirB4 protein [Anaplasma marginale str. St. Maries]
MSFIDSFVRKFRLKKRGDEDQGSEEKSSATVEEVHSSSYAAGGADSYVEFIAPACHYNEETLLNKSGGLV
QIIRIEDYADSSGLGSLRDAIRTVISNVRDPSIAFWLYTVREECKFKLDWHETRDFSDSLHSLYEDSIGS
RRTYANEVYIAVVTQPLREKLDGMISALTFGRVKKRHKSFLASKVQQLSRVTSAMVAELQCFSARKLGVV
RCEDGKWRSELLEFLSYLVTLRRGERFLEFRDSAHTIAAGCGLAVGFNTLKISDQEGARYGAILGVKEYT
GESLDAIDMCLQQECEFVITEVIQFVPSVQVKDAYRRQTELLEISGDAELAKIARLEEVMSTDESSIGDC
CKRKVSCMVISNSVPSLKKDIKKMVAAFSELGAIVVRVDLALEDDFWANMPGSFRYVLGMRFAMVKAACT
FAMTHHFPSGALKGGRWHEAITLFFSNQNLPYFFSFHAGDKGHTLCLGPQDSHMTLIMNFIISESRRLRV
KSVVFDYSGKSIIFATAINGQYNRIDDRQGKVTQFFNPFNVHDTPINREIAVGVVERMAGTLEPPSEAIK
LAAREVVDKIFSIPMESRTPDKVRECIEMLGESARAWWGAQGAFSRLISDTTEIELDGEFVVINVGMLAG
KQECMGAILYFLLRSLENRFNGEPTILVMYEAWVMDVVFPDESEFDAWMERLTARNVVVVFAAENIRAIS
TSKLIRYASKHIETRIFMPNVIIGSQQQVRVFGLSKEEVDVMLQIPHHEGHFFIKQGSSSVVLALKLRDK
ETRVLSANRTTIKLMYEAIAEKGKDWLPAFHAKCDKLAQ
 
Nucleotide Sequence: 2430 bp     [Download]
>gi|56416370|ref|NC_004842.2|:c958638-956209 Anaplasma marginale str. St. Maries chromosome, complete genome
GTGTCTTTCATAGATAGTTTTGTGCGCAAATTTCGCCTGAAGAAAAGGGGCGATGAGGATCAAGGCTCTG
AAGAGAAGAGCAGTGCTACAGTTGAGGAGGTACACAGCTCCTCCTATGCAGCAGGTGGGGCGGATTCCTA
CGTGGAGTTCATAGCACCCGCCTGCCACTACAACGAAGAGACGCTGCTGAACAAAAGTGGGGGTCTGGTA
CAAATAATACGGATAGAAGACTATGCCGACAGTTCAGGTTTGGGGTCTCTCAGGGATGCTATAAGGACTG
TTATATCGAACGTGCGGGATCCGAGCATTGCATTTTGGCTATACACTGTTAGGGAAGAGTGCAAATTTAA
ACTTGATTGGCACGAGACGCGGGACTTTTCTGATTCTTTGCACTCCCTGTACGAGGACTCTATAGGCTCA
AGGCGTACTTACGCTAATGAGGTATACATTGCTGTGGTGACTCAGCCTCTGCGCGAGAAGCTGGATGGCA
TGATCAGTGCGCTGACGTTCGGCCGAGTCAAAAAGAGACATAAGAGCTTTTTGGCCTCTAAAGTGCAACA
GTTATCCAGGGTAACTTCCGCCATGGTGGCAGAACTACAATGTTTTTCTGCTAGAAAGCTTGGGGTGGTC
CGCTGCGAAGACGGAAAATGGCGGTCTGAATTACTGGAGTTTCTGAGCTATTTGGTTACCTTAAGACGTG
GTGAGCGATTCTTAGAATTCCGTGACAGCGCGCATACCATTGCCGCAGGATGTGGTCTGGCTGTTGGGTT
TAACACGTTAAAGATTTCGGATCAAGAAGGGGCAAGATACGGAGCAATTCTTGGCGTCAAGGAATACACA
GGTGAATCTCTAGATGCGATTGACATGTGTTTACAGCAAGAGTGCGAGTTCGTCATAACAGAAGTGATAC
AATTCGTGCCGAGTGTGCAGGTCAAGGATGCGTACAGGAGGCAGACCGAACTGTTGGAGATAAGCGGAGA
CGCGGAACTGGCAAAGATTGCACGTCTGGAAGAGGTTATGTCCACCGACGAAAGCTCAATTGGTGATTGT
TGTAAGCGGAAAGTGAGCTGCATGGTCATCTCAAACAGTGTCCCATCCCTCAAGAAGGACATAAAGAAAA
TGGTTGCCGCGTTTTCAGAGTTGGGTGCAATCGTGGTAAGGGTTGACTTGGCCCTGGAAGATGACTTCTG
GGCCAACATGCCCGGTAGTTTCCGCTACGTTCTTGGGATGCGGTTTGCAATGGTGAAAGCCGCATGCACT
TTTGCTATGACGCACCACTTTCCTTCGGGTGCGCTTAAGGGAGGGCGATGGCACGAGGCCATTACGCTGT
TTTTTTCCAACCAAAACCTGCCGTATTTCTTTAGCTTCCACGCGGGGGATAAGGGGCACACGCTTTGCCT
AGGTCCGCAGGATTCACACATGACCTTAATAATGAATTTCATAATTTCAGAGTCCAGAAGGTTGCGCGTG
AAGTCTGTGGTGTTCGACTATAGCGGAAAATCCATTATTTTTGCTACTGCAATTAACGGGCAGTACAACA
GGATAGATGATAGGCAAGGCAAAGTAACCCAGTTCTTCAATCCGTTCAATGTGCACGATACCCCGATTAA
TCGCGAGATAGCTGTTGGGGTTGTGGAAAGAATGGCCGGTACGCTTGAGCCGCCCAGCGAGGCAATCAAA
CTCGCTGCCAGAGAGGTTGTTGATAAGATATTCTCAATCCCCATGGAGTCCCGTACGCCGGACAAAGTGC
GGGAATGCATAGAAATGTTAGGGGAGTCAGCGCGTGCTTGGTGGGGGGCCCAGGGGGCTTTTTCGCGCCT
AATATCAGACACGACGGAAATAGAGTTGGATGGGGAGTTTGTGGTAATTAACGTTGGCATGCTTGCTGGC
AAACAGGAGTGTATGGGTGCGATATTGTATTTTCTCCTGCGTTCACTCGAAAACCGCTTTAACGGAGAGC
CGACCATTCTTGTGATGTATGAGGCCTGGGTCATGGATGTGGTGTTTCCGGATGAGAGCGAGTTTGATGC
GTGGATGGAGAGGCTTACCGCACGAAACGTTGTGGTGGTGTTTGCAGCAGAAAACATTCGTGCTATCTCC
ACAAGTAAGCTTATAAGATATGCTAGCAAACACATCGAAACGCGGATTTTCATGCCTAATGTTATCATAG
GCAGCCAGCAGCAGGTTAGGGTGTTTGGCCTGTCCAAAGAAGAAGTGGATGTCATGTTGCAGATACCCCA
TCATGAGGGGCATTTCTTCATCAAACAAGGCAGTTCATCGGTAGTTTTGGCGCTGAAGCTGCGAGACAAA
GAGACGAGAGTGCTATCCGCAAATAGAACGACAATAAAACTCATGTACGAAGCGATTGCAGAGAAGGGCA
AGGATTGGCTACCTGCATTTCATGCAAAGTGCGATAAACTCGCGCAGTAA
 Primer design