SecReT4
Protein ID: 94310202
T4SS name [ID]Trb [262]
Gene symboltraF
Locus tagRmet_1258
StrainCupriavidus metallidurans CH34
Repliconchromosome [GenBank: NC_007973] [Browse all T4SS(s) in this replicon]
Location [Strand]1378405..1378992 [+]
Productplasmid conjugal transfer transmembrane protein
Component typeTraF
UniProt IDQ1LNY3
KEGG IDrme:Rmet_1258
PDB IDNA
Domain hit(s) vs Pfam Peptidase_S26 [PF10502], Evalue: 9.9e-55, Aligned region: 46..190
Protein Sequence: 195 a.a.     [Download]
>gi|94310202|ref|YP_583412.1| traF gene product [Cupriavidus metallidurans CH34]
MTAVSTASTAPRPRSRLRARLVLAGLSACGLAALAWASFVHPLPRLIYNPSDSVAVGWYRVDPLHHGTAS
LPRPLSVGSIVLTTLPPDAAVLAAQRGYLPTRVPLLKRVGAVAPQEVCITGRVVRIDGVLSAAVLPADRW
GRPLPSWQQCRRLEPGELFLLSVTNQASFDSRYFGPVSTSAVIGVAHPVWLESRP
 
Nucleotide Sequence: 588 bp     [Download]
>gi|94308945|ref|NC_007973.1|:1378405-1378992 Cupriavidus metallidurans CH34 chromosome, complete genome
ATGACCGCCGTTTCGACTGCCAGCACCGCGCCGCGTCCTCGCTCGCGCTTGCGCGCTCGCCTCGTGCTGG
CGGGCCTGTCCGCCTGCGGCCTCGCTGCGCTGGCCTGGGCGTCCTTCGTGCATCCGCTGCCGCGCCTGAT
CTACAACCCATCCGACAGCGTGGCGGTCGGCTGGTATCGCGTCGATCCGCTGCACCACGGCACCGCCTCG
CTGCCACGTCCTTTGTCCGTGGGCAGCATCGTCCTGACCACGCTGCCGCCAGACGCCGCCGTGCTGGCCG
CGCAGCGCGGCTACCTGCCGACGCGCGTGCCGCTGCTCAAGCGCGTGGGCGCCGTCGCGCCGCAGGAGGT
GTGCATCACTGGCCGCGTTGTCCGCATTGACGGCGTGCTTTCGGCCGCCGTGCTGCCTGCTGACCGCTGG
GGCCGGCCGCTGCCATCCTGGCAGCAATGCCGTCGCCTCGAACCCGGCGAACTGTTCCTCTTGAGTGTGA
CCAACCAGGCGTCGTTCGACAGCCGGTATTTCGGGCCGGTCAGCACATCCGCCGTGATCGGCGTCGCGCA
TCCGGTCTGGCTGGAGTCACGCCCATGA
 Primer design