T4SS ID104
StrainEscherichia coli plasmid p1658/97 (NC_004998)
Repliconplasmid p1658/97 [Browse all T4SS(s) in this replicon]
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components

The information of T4SS components from NC_004998
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1p165897_001 (orf1)14..301 [+], 28832469974hypothetical protein 
2p165897_002 (orf2)423..1244 [+], 82232469975hypothetical protein 
3p165897_003 (orf3)1541..2050 [-], 51032469976lytic transglycosylase  Orf169_F
4p165897_004 (traM)2464..2847 [+], 38432469977conjugal transfer protein TraM  TraM_F
5p165897_005 (traJ)3034..3723 [+], 69032469978conjugal transfer transcriptional regulator TraJ 
6p165897_006 (traY)3822..4217 [+], 39632469979conjugal transfer protein TraY  TraY_F
7p165897_007 (traA)4250..4615 [+], 36632469980conjugal transfer pilin subunit TraA  TraA_F
8p165897_008 (traL)4630..4941 [+], 31232469981conjugal transfer pilus assembly protein TraL  TraL_F
9p165897_009 (traE)4963..5529 [+], 56732469982conjugal transfer pilus assembly protein TraE  TraE_F
10p165897_010 (traK)5516..6244 [+], 72932469983conjugal transfer protein TraK  TraK_F
11p165897_011 (traB)6244..7671 [+], 142832469984conjugal transfer pilus assembly protein TraB  TraB_F
12p165897_012 (traP)7661..8251 [+], 59132469985conjugal transfer protein TraP 
13p165897_013 (trbD)8238..8435 [+], 19832469986conjugal transfer protein TrbD 
14p165897_014 (trbG)8447..8698 [+], 25232469987conjugal transfer protein TrbG 
15p165897_015 (traV)8695..9210 [+], 51632469988conjugal transfer protein TraV  TraV_F
16p165897_016 (traR)9345..9566 [+], 22232469989conjugal transfer protein TraR 
17p165897_017 (traC)9726..12353 [+], 262832469990conjugal transfer ATP-binding protein TraC  TraC_F
18p165897_018 (trbI)12350..12736 [+], 38732470111conjugal transfer protein TrbI 
19p165897_019 (traW)12733..13365 [+], 63332469991conjugal transfer pilus assembly protein TraW  TraW_F
20p165897_020 (traU)13362..14354 [+], 99332469992conjugal transfer pilus assembly protein TraU  TraU_F
21p165897_021 (trbC)14363..15001 [+], 63932469993conjugal transfer pilus assembly protein TrbC  TrbC_F
22p165897_022 (traN)14998..16806 [+], 180932469994conjugal transfer mating pair stabilization protein TraN  TraN_F
23p165897_023 (trbE)16830..17090 [+], 26132469995conjugal transfer protein TrbE 
24p165897_024 (traF)17053..17826 [+], 77432469996conjugal pilus assembly protein TraF  TraF_F
25p165897_025 (trbA)17842..18189 [+], 34832469997conjugal transfer protein TrbA 
26p165897_026 (artA)18191..18505 [-], 31532469998hypothetical protein 
27p165897_027 (traQ)18586..18870 [+], 28532469999conjugal transfer pilin chaperone TraQ  TraQ_F
28p165897_028 (trbB)18857..19402 [+], 54632470000conjugal transfer protein TrbB 
29p165897_029 (trbJ)19332..19673 [+], 34232470001conjugal transfer protein TrbJ 
30p165897_030 (trbF)19660..19965 [+], 30632470002conjugal transfer protein TrbF 
31p165897_031 (traH)20038..21414 [+], 137732470003conjugal transfer pilus assembly protein TraH  TraH_F
32p165897_032 (traG)21411..24227 [+], 281732470004conjugal transfer mating pair stabilization protein TraG  TraG_F
33p165897_033 (traS)24260..24781 [+], 52232470005conjugal transfer entry exclusion protein TraS 
34p165897_034 (traT)24803..25537 [+], 73532470006conjugal transfer surface exclusion protein TraT 
35p165897_035 (traD)25790..27943 [+], 215432470007conjugal transfer protein TraD  TraD_F
36p165897_036 (trbH)27943..28662 [+], 72032470008TrbH 
37p165897_037 (orf5)27952..28350 [-], 39932470009plasmid maintenance protein 
38p165897_038 (orf6)28350..28577 [-], 22832470010hypothetical protein 
39p165897_039 (traI)28659..33929 [+], 527132470011conjugal transfer nickase/helicase TraI  TraI_F
40p165897_040 (traX)33949..34695 [+], 74732470012conjugal transfer pilus acetylation protein TraX  TraX_F
41p165897_041 (finO)34750..35310 [+], 56132470013conjugal transfer fertility inhibition protein FinO 
42p165897_042 (orf7)35452..35706 [+], 25532470014hypothetical protein 
43p165897_043 (orfA)35903..36364 [+], 46232470015hypothetical protein 
44p165897_044 (orf8)36410..36619 [+], 21032470016putative regulator 
45p165897_045 (orf9)36787..37230 [+], 44432470017hypothetical protein 
46p165897_046 (repA6)37955..38029 [+], 7532470112leader peptide RepL 
47p165897_047 (repA1)38022..38879 [+], 85832470018replication protein 
48p165897_048 (repA4)39243..39449 [+], 20732470113hypothetical protein 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Zienkiewicz M; Kern-Zdanowicz I; Golebiewski M; Zylinska J; Mieczkowski P; Gniadkowski M; Bardowski J; Ceglowski P (2007). Mosaic structure of p1658/97, a 125-kilobase plasmid harboring an active amplicon with the extended-spectrum beta-lactamase gene blaSHV-5. Antimicrob Agents Chemother. 51(4):1164-71. [PudMed:17220406]