SecReT4
T4SS ID106
StrainEscherichia coli plasmid pETN48 (NC_014615)
Repliconplasmid pETN48 [Browse all T4SS(s) in this replicon]
AccessionNC_014615
Location1574..35145
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111011
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_014615
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ETN48_p0001 (yubO)51..338 [+], 288310286350hypothetical protein 
2ETN48_p0002 (yubP)348..1277 [+], 930310286351hypothetical protein 
3ETN48_p0003 (yubQ)1574..2176 [-], 603310286352transglycosylase  Orf169_F
4ETN48_p0004 (traM)2497..2880 [+], 384310286353conjugal transfer protein M  TraM_F
5ETN48_p0005 (traJ)3067..3756 [+], 690310286354positive regulator of conjugal transfer operon 
6ETN48_p0006 (traY)3849..4250 [+], 402310286355oriT nicking conjugative transfer protein  TraY_F
7ETN48_p0007 (traA)4283..4648 [+], 366310286356fimbrial protein precursor TraA  TraA_F
8ETN48_p0008 (traL)4663..4974 [+], 312310286357F pilus assembly protein TraL  TraL_F
9ETN48_p0009 (traE)4996..5562 [+], 567310286358F pilus assembly protein TraE  TraE_F
10ETN48_p0010 (traK)5549..6277 [+], 729310286359F pilus assembly protein TraK  TraK_F
11ETN48_p0011 (traB)6277..7704 [+], 1428310286360F pilus assembly protein TraB  TraB_F
12ETN48_p0012 (traP)7694..8284 [+], 591310286361conjugal transfert protein TraP 
13ETN48_p0013 (trbD)8238..8468 [+], 231310286362hypothetical protein 
14ETN48_p0014 (trbG)8480..8731 [+], 252310286363conjugal transfer protein TrbG 
15ETN48_p0015 (tnp)8866..9192 [+], 327310286364transposase 
16ETN48_p0016 (tnp)9192..10079 [+], 888310286365transposase 
17ETN48_p0018 (traR)10686..10907 [+], 222310286366conjugal transfer protein TraR 
18ETN48_p0019 (traC)11067..13694 [+], 2628310286367F pilus assembly protein TraC  TraC_F
19ETN48_p0021 (trbI)13691..14077 [+], 387310286368F pilus extension/retraction protein TrbI 
20ETN48_p0022 (traW)14074..14706 [+], 633310286369F pilus assembly protein TraW  TraW_F
21ETN48_p0023 (traU)14703..15695 [+], 993310286370conjugal transfer protein TraU  TraU_F
22ETN48_p0024 (trbC)15701..16342 [+], 642310286371F pilus assembly protein TrbC  TrbC_F
23ETN48_p0025 (traN)16339..18147 [+], 1809310286372conjugal transfer mating contact stabilization protein TraN  TraN_F
24ETN48_p0026 (trbE)18174..18431 [+], 258310286373conjugal transfer protein TrbE 
25ETN48_p0027 (traF)18394..19167 [+], 774310286374conjugal pilus assembly protein TraF  TraF_F
26ETN48_p0028 (trbA)19181..19522 [+], 342310286375protein trbA 
27ETN48_p0029 (artA)19503..19838 [-], 336310286376protein artA 
28ETN48_p0030 (traQ)19919..20203 [+], 285310286377F pilin synthesis protein TraQ  TraQ_F
29ETN48_p0031 (trbB)20190..20744 [+], 555310286378disulfide bond isomerase TrbB 
30ETN48_p0032 (trbJ)20641..21048 [+], 408310286379conjugal transfer protein TrbJ 
31ETN48_p0033 (TrbF)21002..21394 [+], 393310286380TrbF protein 
32ETN48_p0034 (traH)21378..22754 [+], 1377310286381F pilus assembly protein TraH  TraH_F
33ETN48_p0035 (traG)22751..25576 [+], 2826310286382mating contact stabilization protein TraG  TraG_F
34ETN48_p0036 (traS)25573..26082 [+], 510310286383conjugal transfer entry exclusion protein TraS 
35ETN48_p0037 (traT)26096..26827 [+], 732310286384complement resistance and surface exclusion outer membrane protein TraT 
36ETN48_p0038 (traD)27079..29259 [+], 2181310286385conjugal transfer coupling protein TraD  TraD_F
37ETN48_p0039 (traI)29259..34379 [+], 5121310286386protein TraI (DNA helicase I)  TraI_F
38ETN48_p0040 (traX)34342..35145 [+], 804310286387F pilin acetylase traX  TraX_F
39ETN48_p0041 (finO)35200..35760 [+], 561310286388fertility inhibition protein FinO (Conjugal transfer repressor) 
40ETN48_p0042 (yigA)35894..36106 [+], 213310286389hypothetical protein 
41ETN48_p004437212..37391 [+], 180310286390hypothetical protein 
42ETN48_p194 (srnB)37473..37784 [+], 312310286391modulator of post-segregation killing protein SrnB 
43ETN48_p004537934..38101 [-], 168310286392hypothetical protein 
44ETN48_p0046 (repA2)38068..38325 [+], 258310286393replication regulatory protein RepA2 (CopB) 
45ETN48_p004839186..39305 [-], 120310286394hypothetical protein 
46ETN48_p004939308..39553 [-], 246310286395hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014615