SecReT4
T4SS ID109
StrainEscherichia coli Vir68 plasmid pVir68 (NC_012944)
Repliconplasmid pVir68 [Browse all T4SS(s) in this replicon]
AccessionNC_012944
Location56097..89060
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_012944
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pVir_48 (psiB)52429..52863 [+], 435253801022plasmid SOS inhibition protein B 
2pVir_49 (psiA)52860..53579 [+], 720253801023plasmid SOS inhibition protein A 
3pVir_5054574..54861 [+], 288253801024hypothetical protein 
4pVir_5154905..55801 [+], 897253801025hypothetical protein 
5pVir_53 (ygfA)56097..56699 [-], 603253801026lytic transglycosylase  Orf169_F
6pVir_54 (traM)57032..57403 [+], 372253801027conjugal transfer protein TraM  TraM_F
7pVir_55 (traJ)57591..58289 [+], 699253801028conjugative transfer regulatory protein TraJ 
8pVir_56 (traA)58645..59010 [+], 366253801029conjugal transfer pilin subunit TraA  TraA_F
9pVir_57 (traL)59025..59336 [+], 312253801030conjugal transfer pilus assembly protein TraL  TraL_F
10pVir_58 (traE)59358..59924 [+], 567253801031conjugal transfer pilus assembly protein TraE  TraE_F
11pVir_59 (traB)59911..60639 [+], 729253801032conjugal transfer protein TraK  TraK_F
12pVir_60 (traK)60639..62066 [+], 1428253801033conjugal transfer pilus assembly protein TraB  TraB_F
13pVir_61 (traP)62056..62646 [+], 591253801034conjugal transfer protein TraP 
14pVir_62 (trbG)62842..63093 [+], 252253801035conjugal transfer protein TrbG 
15pVir_63 (traV)63090..63605 [+], 516253801036conjugal transfer protein TraV  TraV_F
16pVir_64 (traC)64121..66748 [+], 2628253801037conjugal transfer ATP-binding protein TraC  TraC_F
17pVir_65 (trbI)66745..67131 [+], 387253801038conjugal transfer protein TrbI 
18pVir_66 (traW)67128..67760 [+], 633253801039conjugal transfer pilus assembly protein TraW  TraW_F
19pVir_67 (traU)67757..68749 [+], 993253801040conjugal transfer pilus assembly protein TraU  TraU_F
20pVir_68 (trbC)68755..69396 [+], 642253801041conjugal transfer pilus assembly protein TrbC  TrbC_F
21pVir_69 (traN)69393..71201 [+], 1809253801042conjugal transfer mating pair stabilization protein TraN  TraN_F
22pVir_70 (trbE)71225..71485 [+], 261253801043conjugal transfer protein TrbE 
23pVir_71 (traF)71448..72221 [+], 774253801044conjugal pilus assembly protein TraF  TraF_F
24pVir_72 (trbA)72237..72584 [+], 348253801045conjugal transfer protein TrbA 
25pVir_72a (artA)72586..72900 [-], 315253801046hypothetical protein 
26pVir_73 (traQ)72981..73265 [+], 285253801047conjugal transfer pilin chaperone TraQ  TraQ_F
27pVir_74 (trbB)73252..73797 [+], 546253801048conjugal transfer protein TrbB 
28pVir_75 (trbJ)73727..74068 [+], 342253801049conjugal transfer protein TrbJ 
29pVir_76 (trbF)74022..74435 [+], 414253801050conjugal transfer protein TrbF 
30pVir_77 (traH)74432..75808 [+], 1377253801051conjugal transfer pilus assembly protein TraH  TraH_F
31pVir_78 (traG)75805..78627 [+], 2823253801052conjugal transfer mating pair stabilization protein TraG  TraG_F
32pVir_79 (traS)78643..79140 [+], 498253801053conjugal transfer entry exclusion protein TraS 
33pVir_80 (traT)79073..79903 [+], 831253801054conjugal transfer surface exclusion protein TraT 
34pVir_81 (traD)80156..82309 [+], 2154253801055conjugal transfer protein TraD  TraD_F
35pVir_82 (trbH)82309..83028 [+], 720253801056conjugal transfer protein TrbH 
36pVir_83 (traI)83004..88295 [+], 5292253801057conjugal transfer nickase/helicase TraI  TraI_F
37pVir_84 (traX)88599..89060 [+], 462253801058conjugal transfer acetylation protein TraX  TraX_F
38pVir_8589119..89979 [+], 861253801059hypothetical protein 
39pVir_86 (finO)90029..90643 [+], 615253801060conjugal transfer fertility inhibition protein FinO 
40pVir_87 (repA3)92379..92681 [-], 303253801061Replication protein RepA3 
41pVir_88 (repA)92859..93143 [+], 285253801062RepFIC initiation protein RepA 
42pVir_89 (repA1)93136..93993 [+], 858253801063replication protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_012944