SecReT4
SecReT4
T4SS ID113
StrainEscherichia coli plasmid pAPEC-O2-ColV (NC_007675)
Repliconplasmid pAPEC-O2-ColV [Browse all T4SS(s) in this replicon]
AccessionNC_007675
Location6566..39443
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number011111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_007675
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1O2ColV102 (repB/copB)2554..2814 [-], 26184060746replication protein 
2O2ColV1033054..3644 [-], 59184060747hypothetical protein 
3O2ColV104 (rmoA)3682..3891 [-], 21084060748RmoA 
4O2ColV1053937..4473 [-], 53784060749hypothetical protein 
5O2ColV1064519..4773 [+], 25584060750hypothetical protein 
6O2ColV107 (finO)4984..5544 [-], 56184060751conjugal transfer fertility inhibition protein FinO 
7O2ColV1085647..6507 [-], 86184060752hypothetical protein 
8O2ColV109 (traX)6566..7312 [-], 74784060753conjugal transfer pilus acetylation protein TraX  TraX_F
9O2ColV110 (traI)7332..12602 [-], 527184060754conjugal transfer nickase/helicase TraI  TraI_F
10O2ColV111 (traD)12602..14800 [-], 219984060755conjugal transfer protein TraD  TraD_F
11O2ColV112 (traT)15053..15883 [-], 83184060756conjugal transfer surface exclusion protein TraT 
12O2ColV113 (traS)15816..16319 [-], 50484060757hypothetical protein 
13O2ColV114 (traG)16334..19156 [-], 282384060758conjugal transfer mating pair stabilization protein TraG  TraG_F
14O2ColV115 (traH)19153..20529 [-], 137784060759conjugal transfer pilus assembly protein TraH  TraH_F
15O2ColV116 (trbJ)20526..20888 [-], 36384060760conjugal transfer protein TrbJ 
16O2ColV117 (trbB)20818..21315 [-], 49884060761conjugal transfer protein TrbB 
17O2ColV118 (traQ)21348..21632 [-], 28584060762conjugal transfer pilin chaperone TraQ  TraQ_F
18O2ColV119 (trbA)21751..22098 [-], 34884060763conjugal transfer protein TrbA 
19O2ColV120 (traF)22114..22857 [-], 74484060764conjugal pilus assembly protein TraF  TraF_F
20O2ColV121 (trbE)22850..23110 [-], 26184060765conjugal transfer protein TrbE 
21O2ColV122 (traN)23134..24942 [-], 180984060766conjugal transfer mating pair stabilization protein TraN  TraN_F
22O2ColV123 (trbC)24939..25580 [-], 64284060767conjugal transfer pilus assembly protein TrbC  TrbC_F
23O2ColV124 (traU)25586..26554 [-], 96984060768conjugal transfer pilus assembly protein TraU  TraU_F
24O2ColV125 (traW)26554..27207 [-], 654228861737conjugal transfer pilus assembly protein TraW  TraW_F
25O2ColV126 (trbI)27204..27590 [-], 38784060770conjugal transfer protein TrbI 
26O2ColV127 (traC)27587..30217 [-], 263184060771conjugal transfer ATP-binding protein TraC  TraC_F
27O2ColV12830343..30732 [-], 39084060772hypothetical protein 
28O2ColV12931028..31501 [-], 47484060773hypothetical protein 
29O2ColV130 (traR)31494..31715 [-], 22284060774conjugal transfer protein TraR 
30O2ColV131 (traV)31850..32365 [-], 51684060775conjugal transfer protein TraV  TraV_F
31O2ColV132 (trbD)32611..32928 [-], 31884060776conjugal transfer protein TrbD 
32O2ColV133 (traP)32925..33497 [-], 57384060777conjugal transfer protein TraP 
33O2ColV134 (traB)33487..34914 [-], 142884060778conjugal transfer pilus assembly protein TraB  TraB_F
34O2ColV135 (traE)35630..36196 [-], 56784060779conjugal transfer pilus assembly protein TraE  TraE_F
35O2ColV136 (traL)36218..36529 [-], 31284060780conjugal transfer pilus assembly protein TraL  TraL_F
36O2ColV137 (traA)36544..36903 [-], 36084060781conjugal transfer pilin subunit TraA  TraA_F
37O2ColV138 (traY)36937..37257 [-], 32184060782conjugal transfer protein TraY  TraY_F
38O2ColV139 (traJ)37258..37941 [-], 68484060783hypothetical protein 
39O2ColV140 (traM)38136..38519 [-], 38484060784conjugal transfer protein TraM  TraM_F
40O2ColV14138796..39443 [+], 64884060785lytic transglycosylase  Orf169_F
41O2ColV14239740..40462 [-], 72384060786hypothetical protein 
42O2ColV14340683..40970 [-], 28884060787hypothetical protein 
43O2ColV144 (psiA)42109..42828 [-], 72084060788plasmid SOS inhibition protein A 
44O2ColV145 (psiB)42825..43262 [-], 43884060789plasmid SOS inhibition protein B 
45O2ColV14643214..43504 [+], 29184060790hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_007675