SecReT4
T4SS ID114
StrainPlasmid R100
Repliconplasmid R100 [Browse all T4SS(s) in this replicon]
AccessionNC_002134
Location49965..84502
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111011111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_002134
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1D742_p2003 (yefA)45293..45868 [+], 5769507604hypothetical protein 
2D742_p2091 (psiB)45937..46371 [+], 4359507605plasmid SOS inhibition protein 
3D742_p2092 (psiA)46368..47087 [+], 7209507606plasmid SOS inhibition protein 
4D742_p2093 (mok)47309..47521 [+], 2139507607modulator of Hok protein 
5D742_p2111 (hok)47367..47525 [+], 1599507608post-segregation killing protein 
6D742_p2002 (yehA)47763..48140 [-], 3789507609hypothetical protein 
7D742_p2001 (yeiA)48440..48736 [+], 2979507610hypothetical protein 
8D742_p2116 (32)48847..49668 [+], 8229507611hypothetical protein 
9D742_p2045 (X)49965..50474 [-], 5109507612hypothetical protein  Orf169_F
10D742_p2066 (traM)50890..51273 [+], 3849507613hypothetical protein  TraM_F
11D742_p2069 (traJ)51467..52138 [+], 6729507614positive rugulator of tra operon 
12D742_p2055 (traY)52275..52502 [+], 2289507615component of oriT-specific nickase  TraY_F
13D742_p2078 (traA)52535..52894 [+], 3609507616prepropilin  TraA_F
14D742_p2067 (traL)52909..53220 [+], 3129507617hypothetical protein  TraL_F
15D742_p2074 (traE)53242..53808 [+], 5679507618hypothetical protein  TraE_F
16D742_p2068 (traK)53795..54523 [+], 7299507619hypothetical protein  TraK_F
17D742_p2077 (traB)54523..55974 [+], 14529507620hypothetical protein  TraB_F
18D742_p2064 (traP)55943..56530 [+], 5889507621hypothetical protein 
19D742_p2050 (trbD)56469..56837 [+], 3699507622hypothetical protein 
20D742_p2058 (traV)56834..57349 [+], 5169507623hypothetical protein  TraV_F
21D742_p2062 (traR)57484..57705 [+], 2229507624hypothetical protein 
22D742_p2014 (yfhA)57698..58111 [+], 4149507625hypothetical protein 
23D742_p2013 (yfiA)58104..58577 [+], 4749507626hypothetical protein 
24D742_p2012 (yfiB)58657..58875 [+], 2199507627hypothetical protein 
25D742_p2011 (yfiC)58903..59250 [+], 3489507628hypothetical protein 
26D742_p2076 (traC)59376..62006 [+], 26319507629hypothetical protein  TraC_F
27D742_p2047 (trbI)62003..62389 [+], 3879507630hypothetical protein 
28D742_p2057 (traW)62386..63018 [+], 6339507631hypothetical protein  TraW_F
29D742_p2059 (traU)63015..64007 [+], 9939507632hypothetical protein  TraU_F
30D742_p2010 (ygeA)64031..64342 [+], 3129507633hypothetical protein 
31D742_p2051 (trbC)64351..64989 [+], 6399507634hypothetical protein  TrbC_F
32D742_p2065 (traN)64986..65888 [+], 9039507635hypothetical protein 
33D742_p2054 (traZ)65901..66836 [+], 9369507636hypothetical protein 
34D742_p2049 (trbE)66860..67120 [+], 2619507637hypothetical protein 
35D742_p2073 (traF)67095..67856 [+], 7629507638hypothetical protein  TraF_F
36D742_p2053 (trbA)67870..68214 [+], 3459507639hypothetical protein 
37D742_p2063 (traQ)68333..68617 [+], 2859507640possible cleavage protein of preproplin  TraQ_F
38D742_p2052 (trbB)68604..69149 [+], 5469507641hypothetical protein 
39D742_p2046 (trbJ)69079..69426 [+], 3489507642hypothetical protein 
40D742_p2048 (trbF)69374..69799 [+], 4269507643hypothetical protein 
41D742_p2071 (traH)69777..71159 [+], 13839507644hypothetical protein  TraH_F
42D742_p2072 (traG)71156..73978 [+], 28239507645hypothetical protein  TraG_F
43D742_p2061 (traS)74000..74479 [+], 480452909623possible surface exclusion protein 
44D742_p2060 (traT)74528..75259 [+], 7329507647surface exclusion protein 
45D742_p2009 (yhfA)75417..76199 [+], 7839507648hypothetical protein 
46D742_p2075 (traD)76250..78466 [+], 22179507649hypothetical protein  TraD_F
47D742_p2070 (traI)78466..83736 [+], 52719507650DNA helicase I  TraI_F
48D742_p2056 (traX)83756..84502 [+], 7479507651possible pilin acetylase  TraX_F
49D742_p2004 (yieA)84561..85421 [+], 8619507652hypothetical protein 
50D742_p2117 (finO)85524..86084 [+], 5619507653fertility inhibition protein 
51D742_p2008 (yigA)86213..86425 [+], 2139507654hypothetical protein 
52D742_p2007 (yigB)86669..87130 [+], 4629507655hypothetical protein 
53D742_p2006 (yihA)87423..88013 [+], 5919507656hypothetical protein 
54D742_p2096 (repA2)88253..88507 [+], 2559507657negative regulator of repA1 expression 
55D742_p2094 (repA6)88745..88819 [+], 759507658regulatory reading frame 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_002134