SecReT4
T4SS ID117
StrainEscherichia coli SE11
Repliconplasmid pSE11-2 [Browse all T4SS(s) in this replicon]
AccessionNC_011413
Location39151..72102
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111101111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_011413
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ECSE_P2-0044 (psiB)34922..35356 [+], 435209916873plasmid SOS inhibition protein B 
2ECSE_P2-004535353..36072 [+], 720209916874plasmid SOS inhibition protein A 
3ECSE_P2-004636036..36383 [+], 348209916875hypothetical protein 
4ECSE_P2-004736627..36755 [-], 129209916876hypothetical protein 
5ECSE_P2-004836845..37009 [+], 165209916877hypothetical protein 
6ECSE_P2-004936990..37349 [-], 360209916878hypothetical protein 
7ECSE_P2-005037649..37945 [+], 297209916879hypothetical protein 
8ECSE_P2-005138051..38872 [+], 822209916880hypothetical protein 
9ECSE_P2-005238995..39144 [+], 150209916881hypothetical protein 
10ECSE_P2-005339151..39603 [-], 453209916882hypothetical protein  Orf169_F
11ECSE_P2-005539916..40152 [-], 237209916883hypothetical protein 
12ECSE_P2-005440137..40511 [+], 375209916884conjugal transfer protein TraM  TraM_F
13ECSE_P2-005641158..41406 [+], 249209916885hypothetical protein 
14ECSE_P2-005741490..41696 [+], 207209916886hypothetical protein  TraY_F
15ECSE_P2-005841997..42368 [+], 372209916887putative TraA protein  TraA_F
16ECSE_P2-005942387..42686 [+], 300209916888conjugal transfer pilus assembly protein TraL  TraL_F
17ECSE_P2-006042701..43279 [+], 579209916889conjugal transfer pilus assembly protein TraE  TraE_F
18ECSE_P2-006143254..44033 [+], 780209916890conjugal transfer protein TraK  TraK_F
19ECSE_P2-006244026..45372 [+], 1347209916891conjugal transfer pilus assembly protein TraB  TraB_F
20ECSE_P2-006345369..45902 [+], 534209916892conjugal transfer protein TraV  TraV_F
21ECSE_P2-006445932..48538 [+], 2607209916893conjugal transfer ATP-binding protein TraC  TraC_F
22ECSE_P2-006548517..48933 [+], 417209916894TrbI protein 
23ECSE_P2-006648936..49160 [+], 225209916895TraR protein 
24ECSE_P2-006749166..49774 [+], 609209916896TraW protein  TraW_F
25ECSE_P2-006849771..50769 [+], 999209916897conjugal transfer pilus assembly protein TraU  TraU_F
26ECSE_P2-006950766..51263 [+], 498209916898hypothetical protein 
27ECSE_P2-007051690..51998 [+], 309209916899conjugal transfer protein TrbD 
28ECSE_P2-007152166..52771 [+], 606209916900TrbC protein  TrbC_F
29ECSE_P2-007252768..54702 [+], 1935209916901conjugal transfer mating pair stabilization protein TraN  TraN_F
30ECSE_P2-007354716..55489 [+], 774209916902TraF protein  TraF_F
31ECSE_P2-007455486..55779 [+], 294209916903hypothetical protein 
32ECSE_P2-007555781..56356 [+], 576209916904conjugal transfer protein TrbB 
33ECSE_P2-007656808..58214 [+], 1407209916905conjugal transfer pilus assembly protein TraH  TraH_F
34ECSE_P2-007758214..61102 [+], 2889209916906conjugal transfer mating pair stabilization protein TraG  TraG_F
35ECSE_P2-007861077..61766 [+], 690209916907hypothetical protein 
36ECSE_P2-007961838..62575 [+], 738209916908TraT protein 
37ECSE_P2-008062705..63397 [+], 693209916909hypothetical protein 
38ECSE_P2-008163404..63907 [+], 504209916910hypothetical protein 
39ECSE_P2-008263948..66134 [+], 2187209916911TraD protein  TraD_F
40ECSE_P2-008366134..71350 [+], 5217209916912TraI protein  TraI_F
41ECSE_P2-008471350..72102 [+], 753209916913TraX protein  TraX_F
42ECSE_P2-008572176..72733 [+], 558209916914conjugal transfer fertility inhibition protein FinO 
43ECSE_P2-008672873..73085 [+], 213209916915hypothetical protein 
44ECSE_P2-008773499..74068 [+], 570209916916hypothetical protein 
45ECSE_P2-008874489..74611 [+], 123209916917hypothetical protein 
46ECSE_P2-008974781..75041 [+], 261209916918replication protein 
47ECSE_P2-009075145..75333 [+], 189209916919hypothetical protein 
48ECSE_P2-009175334..76368 [+], 1035209916920replication initiation protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011413