SecReT4
T4SS ID127
StrainPantoea sp. At-9b plasmid pPAT9B05 (NC_014842)
Repliconplasmid pPAT9B05 [Browse all T4SS(s) in this replicon]
AccessionNC_014842
Location56445..92104
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_014842
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pat9b_405151474..51863 [+], 390317052822hypothetical protein 
2Pat9b_405252083..52340 [-], 258317052823SET domain containing 1A 
3Pat9b_405352582..53358 [+], 777317052824hypothetical protein 
4Pat9b_405453400..53768 [+], 369317052825hypothetical protein 
5Pat9b_405553858..54007 [+], 150317052826hypothetical protein 
6Pat9b_405654004..54573 [+], 570317052827hypothetical protein 
7Pat9b_405754664..54885 [+], 222317052828zinc-containing alcohol dehydrogenase family protein 
8Pat9b_405854885..55208 [+], 324317052829Zyxin (Zyxin-2) 
9Pat9b_405955233..55544 [+], 312317052830hypothetical protein 
10Pat9b_406156445..56978 [-], 534317052831Lytic transglycosylase catalytic  Orf169_F
11Pat9b_406257829..58221 [+], 393317052832hypothetical protein 
12Pat9b_406358729..59349 [-], 621317052833hypothetical protein 
13Pat9b_406459561..59953 [+], 393317052834TraA family protein  TraA_F
14Pat9b_406559962..60264 [+], 303317052835type IV conjugative transfer system protein TraL  TraL_F
15Pat9b_406660316..60915 [+], 600317052836TraE family protein  TraE_F
16Pat9b_406760919..61656 [+], 738317052837type-F conjugative transfer system secretin TraK  TraK_F
17Pat9b_406861653..63020 [+], 1368317052838TraB pilus assembly family protein  TraB_F
18Pat9b_406963039..63551 [+], 513317052839NusG antitermination factor 
19Pat9b_407063548..63949 [+], 402317052840hypothetical protein 
20Pat9b_407163960..64433 [+], 474317052841hypothetical protein 
21Pat9b_407264426..64587 [+], 162317052842hypothetical protein 
22Pat9b_407364900..65448 [+], 549317052843type IV conjugative transfer system protein TraV  TraV_F
23Pat9b_407465448..65735 [+], 288317052844hypothetical protein 
24Pat9b_407565725..68370 [+], 2646317052845type-IV secretion system protein TraC  TraC_F
25Pat9b_407668386..68841 [+], 456317052846Type-F conjugative transfer system protein TrbI 
26Pat9b_407768838..69458 [+], 621317052847type-F conjugative transfer system protein TraW  TraW_F
27Pat9b_407869455..69745 [+], 291317052848hypothetical protein 
28Pat9b_407969877..70152 [+], 276317052849hypothetical protein 
29Pat9b_408070307..70648 [+], 342317052850hypothetical protein 
30Pat9b_408170645..71637 [+], 993317052851TraU family protein  TraU_F
31Pat9b_408271647..72270 [+], 624317052852type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
32Pat9b_408372267..74105 [+], 1839317052853conjugal transfer mating pair stabilization protein TraN  TraN_F
33Pat9b_408474105..74902 [+], 798317052854type-F conjugative transfer system pilin assembly protein TraF  TraF_F
34Pat9b_408574913..75383 [+], 471317052855hypothetical protein 
35Pat9b_408675380..75592 [+], 213317052856major facilitator superfamily MFS_1 
36Pat9b_408775582..76208 [+], 627317052857conjugal transfer protein TrbB 
37Pat9b_408876244..76558 [+], 315317052858hypothetical protein 
38Pat9b_408976555..77922 [+], 1368317052859TraH family protein  TraH_F
39Pat9b_409077915..81028 [+], 3114317052860TraG domain-containing protein  TraG_F
40Pat9b_409181050..81625 [+], 576317052861hypothetical protein 
41Pat9b_409281755..82486 [+], 732317052862TraT complement resistance family protein 
42Pat9b_409382572..82886 [+], 315317052863hypothetical protein 
43Pat9b_409483218..83526 [+], 309317052864hypothetical protein 
44Pat9b_409583649..86291 [+], 2643317052865type IV conjugative transfer system coupling protein TraD  TraD_F
45Pat9b_409686288..92104 [+], 5817317052866conjugative transfer relaxase protein TraI  TraI_F
46Pat9b_409792176..92973 [+], 798317052867DSBA oxidoreductase 
47Pat9b_409893725..94666 [+], 942317052868replication initiation protein 
48Pat9b_409995389..95601 [+], 213317052869hypothetical protein 
49Pat9b_410095573..96157 [+], 585317052870hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_014842