SecReT4
T4SS ID162
StrainPlasmid ColIb-P9
Repliconplasmid ColIb-P9 [Browse all T4SS(s) in this replicon]
AccessionNC_002122
Location42807..71646
NameTra_I
FunctionConjugation
ClassificationType IVB; Type I
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number111111111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_002122
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ColIb-P9_p053 (ydiA)38226..39074 [+], 8499507492hypothetical protein 
2ColIb-P9_p054 (nikA)39728..40060 [+], 3339507493relaxosome component 
3ColIb-P9_p055 (nikB)40071..42770 [+], 27009507494relaxase 
4ColIb-P9_p056 (trbC)42807..45098 [-], 22929507495hypothetical protein  TrbC_I
5ColIb-P9_p057 (trbB)45091..46161 [-], 10719507496hypothetical protein  TrbB_I
6ColIb-P9_p058 (trbA)46180..47388 [-], 12099507497hypothetical protein  TrbA_I
7ColIb-P9_p059 (pndC)47541..47825 [+], 2859507498counter protein for PndA 
8ColIb-P9_p060 (pndA)47677..47832 [+], 1569507499post-segregation killing protein 
9ColIb-P9_p061 (exc)49928..50590 [-], 6639507500surface exclusion protein 
10ColIb-P9_p062 (traY)50661..52898 [-], 22389507501hypothetical protein  TraY_I
11ColIb-P9_p063 (traX)52926..53510 [-], 5859507502hypothetical protein  TraX_I
12ColIb-P9_p064 (traW)53539..54741 [-], 12039507503hypothetical protein  TraW_I
13ColIb-P9_p065 (traV)54708..55322 [-], 6159507504hypothetical protein  TraV_I
14ColIb-P9_p066 (traU)55322..58366 [-], 30459507505hypothetical protein  TraU_I
15ColIb-P9_p067 (traT)58456..59256 [-], 8019507506hypothetical protein  TraT_I
16ColIb-P9_p068 (traS)59240..59428 [-], 1899507507hypothetical protein  TraS_I
17ColIb-P9_p069 (traR)59492..59896 [-], 4059507508hypothetical protein  TraR_I
18ColIb-P9_p070 (traQ)59947..60474 [-], 5289507509hypothetical protein  TraQ_I
19ColIb-P9_p071 (traP)60474..61178 [-], 7059507510hypothetical protein  TraP_I
20ColIb-P9_p072 (traO)61178..62467 [-], 12909507511hypothetical protein  TraO_I
21ColIb-P9_p073 (traN)62470..63453 [-], 9849507512hypothetical protein  TraN_I
22ColIb-P9_p074 (traM)63464..64156 [-], 6939507513hypothetical protein  TraM_I
23ColIb-P9_p075 (traL)64153..64500 [-], 3489507514hypothetical protein  TraL_I
24ColIb-P9_p076 (sogL)64518..68285 [-], 37689507515DNA primase 
25ColIb-P9_p077 (sogS)64518..67052 [-], 25359507516DNA primase 
26ColIb-P9_p078 (nuc)68375..68926 [-], 5529507517nuclease 
27ColIb-P9_p079 (traK)68941..69231 [-], 2919507518hypothetical protein  TraK_I
28ColIb-P9_p080 (traJ)69228..70376 [-], 11499507519ATP-binding protein  TraJ_I
29ColIb-P9_p081 (traI)70373..71191 [-], 8199507520hypothetical protein  TraI_I
30ColIb-P9_p082 (traH)71188..71646 [-], 4599507521hypothetical protein  TraH_I
31ColIb-P9_p083 (traG)72041..72625 [-], 5859507522hypothetical protein 
32ColIb-P9_p084 (traF)72685..73887 [-], 12039507523hypothetical protein 
33ColIb-P9_p085 (traE)73973..74797 [-], 8259507524hypothetical protein 
34ColIb-P9_p086 (rci)74948..76102 [-], 11559507525shufflon-specific recombinase 
35ColIb-P9_p087 (shfB)76167..76412 [+], 2469507526shufflon protein B 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Wilkins BM; Thomas AT (2000). DNA-independent transport of plasmid primase protein between bacteria by the I1 conjugation system. Mol Microbiol. 38(3):650-7. [PudMed:11069687] experimental
 
experimental This literature contains experimental investigation