SecReT4
T4SS ID165
StrainEscherichia coli plasmid pCT (NC_014477)
Repliconplasmid pCT [Browse all T4SS(s) in this replicon]
AccessionNC_014477
Location35446..74913
NameTra_I
FunctionNA
ClassificationType IVB; Type I
insolico This T4SS is identified in this study.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number111111111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_014477
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pCT_04930658..31506 [+], 849305667829hypothetical protein 
2pCT_05031593..31934 [-], 342305667830hypothetical protein 
3pCT_051 (nikA)32161..32493 [+], 333305667831relaxome component 
4pCT_052 (nikB)32505..35225 [+], 2721305667832relaxase/mobilisation nuclease 
5pCT_053 (trbC)35446..37746 [-], 2301305667833conjugal transfer protein  TrbC_I
6pCT_054 (trbB)37727..38851 [-], 1125305667834conjugal transfer protein  TrbB_I
7pCT_055 (trbA)38848..40110 [-], 1263305667835conjugal transfer protein  TrbA_I
8pCT_05640742..41038 [+], 297305667836hypothetical protein 
9pCT_057 (parB)41427..41894 [-], 468305667837endonuclease 
10pCT_05842085..42840 [-], 756305667838putative transposase 
11pCT_05942857..44392 [-], 1536305667839putative transposase 
12pCT_06044698..45321 [+], 624305667840hypothetical protein 
13pCT_06145519..45734 [-], 216305667841hypothetical protein 
14pCT_06245738..46106 [-], 369305667842hypothetical protein 
15pCT_06346118..46309 [-], 192305667843hypothetical protein 
16pCT_06446397..46717 [-], 321305667844hypothetical protein 
17pCT_065 (pndC)46821..47114 [+], 294305667845plasmid stability protein 
18pCT_06647259..48845 [-], 1587305667846putative RNA polymerase sigma factor 
19pCT_067 (excA)49119..49772 [-], 654305667847exclusion-determining protein 
20pCT_068 (traY)49860..52025 [-], 2166305667848conjugal transfer integral membrane protein  TraY_I
21pCT_069 (traX)52100..52669 [-], 570305667849conjugal transfer protein  TraX_I
22pCT_070 (traW)52666..53706 [-], 1041305667850conjugal transfer lipoprotein  TraW_I
23pCT_071 (traV)53829..54449 [-], 621305667851conjugal transfer protein  TraV_I
24pCT_072 (traU)54449..57493 [-], 3045305667852conjugal transfer nucleotide-binding protein  TraU_I
25pCT_073 (traT)57788..58501 [-], 714305667853conjugal transfer protein  TraT_I
26pCT_074 (traS)58521..58772 [-], 252305667854conjugal transfer protein  TraS_I
27pCT_075 (traR)58829..59227 [-], 399305667855conjugal transfer protein  TraR_I
28pCT_076 (traQ)59274..59804 [-], 531305667856conjugal transfer protein  TraQ_I
29pCT_077 (traP)59801..60514 [-], 714305667857conjugal transfer protein  TraP_I
30pCT_078 (traO)60511..61848 [-], 1338305667858conjugal transfer protein  TraO_I
31pCT_079 (traN)61852..62826 [-], 975305667859conjugal transfer protein  TraN_I
32pCT_080 (traM)62837..63532 [-], 696305667860conjugal transfer protein  TraM_I
33pCT_081 (traL)63544..63894 [-], 351305667861conjugal transfer protein  TraL_I
34pCT_082 (pri)63911..67972 [-], 4062305667862DNA primase 
35pCT_08468888..69370 [-], 483305667863putative transposase 
36pCT_085 (blaCTX-M-14)69405..70280 [-], 876305667864CTX-M-14 beta-lactamase 
37pCT_086 (tnpA)70530..71792 [-], 1263305667865transposase 
38pCT_087 (traK)72204..72494 [-], 291305667866conjugal transfer protein  TraK_I
39pCT_088 (traJ)72491..73639 [-], 1149305667867conjugal transfer ATPase protein  TraJ_I
40pCT_089 (traI)73623..74288 [-], 666305667868conjugal transfer lipoprotein  TraI_I
41pCT_090 (traH)74326..74913 [-], 588305667869conjugal transfer protein  TraH_I
42pCT_091 (traF)75017..76219 [-], 1203305667870conjugal transfer protein 
43pCT_092 (traE)76321..77142 [-], 822305667871conjugal transfer protein 
44pCT_093 (rci)77355..78479 [-], 1125305667872shufflon-specific DNA recombinase 
45pCT_09478534..78893 [+], 360305667873pilV shufflon protein A 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014477