SecReT4
T4SS ID166
StrainEscherichia coli plasmid pEK204 (NC_013120)
Repliconplasmid pEK204 [Browse all T4SS(s) in this replicon]
AccessionNC_013120
Location39614..69611
NameTra_I
FunctionNA
ClassificationType IVB; Type I
insolico This T4SS is identified in this study.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number111111111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_013120
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pEK204_p4135032..35880 [+], 849256367573hypothetical protein YdiA 
2pEK204_p42 (yggA)35966..36301 [-], 336256367574hypothetical protein 
3pEK204_p43 (nikA)36535..36867 [+], 333256367575plasmid mobilization protein 
4pEK204_p44 (nikB)36878..39577 [+], 2700256367576relaxase 
5pEK204_p45 (trbC)39614..41905 [-], 2292256367577IcmO-like type IV secretion system protein  TrbC_I
6pEK204_p46 (trbB)41898..42968 [-], 1071256367578protein-disulfide  TrbB_I
7pEK204_p47 (trbA)42987..44195 [-], 1209256367579TrbA protein  TrbA_I
8pEK204_p48 (finQ)44502..45431 [-], 930256367580FinQ 
9pEK204_p49 (pndC)45769..46053 [+], 285256367581post-segregation killing protein 
10pEK204_p50 (pndA)45908..46060 [+], 153256367582post-segregation killing protein 
11pEK204_p51 (exc)47893..48555 [-], 663256367583surface exclusion protein 
12pEK204_p52 (traY)48626..50863 [-], 2238256367584TraY  TraY_I
13pEK204_p53 (traX)50891..51475 [-], 585256367585TraX protein  TraX_I
14pEK204_p54 (traW)51504..52706 [-], 1203256367586TraW protein  TraW_I
15pEK204_p55 (traV)52673..53287 [-], 615256367587TraV protein  TraV_I
16pEK204_p56 (traU)53287..56331 [-], 3045256367588TraU protein  TraU_I
17pEK204_p57 (traT)56421..57221 [-], 801256367589TraT protein  TraT_I
18pEK204_p58 (traS)57205..57393 [-], 189256367590TraS protein  TraS_I
19pEK204_p59 (traR)57457..57861 [-], 405256367591TraR protein  TraR_I
20pEK204_p60 (traQ)57912..58439 [-], 528256367592TraQ protein  TraQ_I
21pEK204_p61 (traP)58439..59143 [-], 705256367593TraP protein  TraP_I
22pEK204_p62 (traO)59143..60432 [-], 1290256367594TraO protein  TraO_I
23pEK204_p63 (traN)60435..61418 [-], 984256367595TraN protein  TraN_I
24pEK204_p64 (traM)61429..62121 [-], 693256367596TraM protein  TraM_I
25pEK204_p65 (traL)62118..62465 [-], 348256367597TraL protein  TraL_I
26pEK204_p66 (sogL)62483..66250 [-], 3768256367598SogL protein 
27pEK204_p67 (sogS)62483..65017 [-], 2535256367599SogS protein 
28pEK204_p68 (nuc)66340..66891 [-], 552256367600EDTA-resistant nuclease 
29pEK204_p69 (traK)66906..67196 [-], 291256367601TraK protein  TraK_I
30pEK204_p70 (traJ)67193..68341 [-], 1149256367602TraJ protein  TraJ_I
31pEK204_p71 (traI)68338..69156 [-], 819256367603TraI protein  TraI_I
32pEK204_p72 (traH)69153..69611 [-], 459256367604TraH protein  TraH_I
33pEK204_p73 (traG)70005..70589 [-], 585256367605TraG protein 
34pEK204_p74 (traF)70649..71851 [-], 1203256367606TraF protein 
35pEK204_p75 (traE)71937..72761 [-], 825256367607TraE protein 
36pEK204_p76 (rci)72912..74066 [-], 1155256367608shufflon-specific DNA recombinase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_013120