SecReT4
T4SS ID167
StrainEscherichia coli plasmid pO26-Vir (NC_012487)
Repliconplasmid pO26-Vir [Browse all T4SS(s) in this replicon]
AccessionNC_012487
Location114003..147110
NameTra_I
FunctionNA
ClassificationType IVB; Type I
insolico This T4SS is identified in this study.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number111111111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_012487
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1p026VIR_p123109296..109922 [+], 627226201062PilU 
2p026VIR_p124109940..111301 [+], 1362226201063minor pilin subunit 
3p026VIR_p125111340..111597 [-], 258226201064hypothetical protein 
4p026VIR_p126111774..112595 [+], 822226201065hypothetical protein 
5p026VIR_p127112697..113899 [+], 1203226201066hypothetical protein 
6p026VIR_p128114003..114461 [+], 459226201067lipoprotein  TraH_I
7p026VIR_p129114458..115294 [+], 837226201068lipoprotein  TraI_I
8p026VIR_p130 (traJ)115278..116426 [+], 1149226201069plasmid transfer ATPase TraJ  TraJ_I
9p026VIR_p131116423..116713 [+], 291226201070hypothetical protein  TraK_I
10p026VIR_p132116777..120838 [+], 4062226201071DNA primase 
11p026VIR_p133120855..121205 [+], 351226201072TraL  TraL_I
12p026VIR_p134121217..121912 [+], 696226201073TraM  TraM_I
13p026VIR_p135121626..122897 [+], 1272226201074TraN  TraN_I
14p026VIR_p136122901..124238 [+], 1338226201075TraO  TraO_I
15p026VIR_p137124235..124948 [+], 714226201076TraP  TraP_I
16p026VIR_p138124945..125475 [+], 531226201077TraQ  TraQ_I
17p026VIR_p139125441..125920 [+], 480226201078truncated TraR  TraR_I
18p026VIR_p140125977..126228 [+], 252226201079TraS  TraS_I
19p026VIR_p141126143..126961 [+], 819226201080hypothetical protein  TraT_I
20p026VIR_p142126954..127205 [-], 252226201081hypothetical protein 
21p026VIR_p143127256..130300 [+], 3045226201082TraU  TraU_I
22p026VIR_p144130300..130596 [+], 297226201083TraV  TraV_I
23p026VIR_p145130773..132083 [+], 1311226201084truncated lipoprotein  TraW_I
24p026VIR_p146132080..132649 [+], 570226201085hypothetical protein  TraX_I
25p026VIR_p147132925..134889 [+], 1965226201086truncated integral membrane protein  TraY_I
26p026VIR_p148134977..135630 [+], 654226201087surface exclusion protein 
27p026VIR_p149135904..137490 [+], 1587226201088hypothetical protein 
28p026VIR_p150137635..137838 [-], 204226201089plasmid stability protein 
29p026VIR_p151138080..138352 [+], 273226201090hypothetical protein 
30p026VIR_p152138449..138640 [+], 192226201091hypothetical protein 
31p026VIR_p153138637..139020 [+], 384226201092hypothetical protein 
32p026VIR_p154139024..139239 [+], 216226201093hypothetical protein 
33p026VIR_p155139437..140117 [-], 681226201094hypothetical protein 
34p026VIR_p156 (parB)140220..140687 [+], 468226201095ParB protein 
35p026VIR_p157140837..141013 [+], 177226201096hypothetical protein 
36p026VIR_p158141076..141327 [-], 252226201097hypothetical protein 
37p026VIR_p159141433..141651 [-], 219226201098hypothetical protein 
38p026VIR_p160141760..141867 [-], 108226201099hypothetical protein 
39p026VIR_p161141908..142015 [-], 108226201100hypothetical protein 
40p026VIR_p162142428..143708 [+], 1281226201101TrbA  TrbA_I
41p026VIR_p163143705..144829 [+], 1125226201102TrbB  TrbB_I
42p026VIR_p164144810..147110 [+], 2301226201103conjugal transfer protein  TrbC_I
43p026VIR_p165147331..150051 [-], 2721226201104relaxase 
44p026VIR_p166150063..150395 [-], 333226201105relaxosome component 
45p026VIR_p167150537..150638 [+], 102226201106hypothetical protein 
46p026VIR_p168150628..150963 [+], 336226201141hypothetical protein 
47p026VIR_p169151049..151897 [-], 849226201107hypothetical protein 
48p026VIR_p170151939..152103 [-], 165226201108hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_012487