SecReT4
T4SS ID169
StrainEscherichia coli SE11
Repliconplasmid pSE11-1 [Browse all T4SS(s) in this replicon]
AccessionNC_011419
Location51842..80231
NameTra_I
Functionconjugation
ClassificationType IVB; Type I
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number111111111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_011419
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ECSE_P1-007147258..48109 [+], 852209922023hypothetical protein 
2ECSE_P1-007248195..48530 [-], 336209922024hypothetical protein 
3ECSE_P1-007348763..49095 [+], 333209922025relaxosome component NikA 
4ECSE_P1-007449106..51805 [+], 2700209922026relaxase NikB 
5ECSE_P1-007551842..54133 [-], 2292209922027TrbC protein  TrbC_I
6ECSE_P1-007654126..55196 [-], 1071209922028TrbB protein  TrbB_I
7ECSE_P1-007755215..56423 [-], 1209209922029TrbA protein  TrbA_I
8ECSE_P1-007856576..56860 [+], 285209922030plasmid stability protein 
9ECSE_P1-007956939..57190 [-], 252209922031hypothetical protein 
10ECSE_P1-008057656..57781 [+], 126209922032hypothetical protein 
11ECSE_P1-008157846..58088 [-], 243209922033hypothetical protein 
12ECSE_P1-008258207..58416 [-], 210209922034putative regulator protein 
13ECSE_P1-008358514..59176 [-], 663209922035surface exclusion protein ExcA 
14ECSE_P1-008459247..61484 [-], 2238209922036TraY protein  TraY_I
15ECSE_P1-008561512..62096 [-], 585209922037TraX protein  TraX_I
16ECSE_P1-008662125..63327 [-], 1203209922038TraW protein  TraW_I
17ECSE_P1-008763294..63908 [-], 615209922039TraV protein  TraV_I
18ECSE_P1-008863908..66952 [-], 3045209922040TraU protein  TraU_I
19ECSE_P1-008967042..67842 [-], 801209922041TraT protein  TraT_I
20ECSE_P1-009067826..68014 [-], 189209922042TraS protein  TraS_I
21ECSE_P1-009168078..68482 [-], 405209922043TraR protein  TraR_I
22ECSE_P1-009268532..69059 [-], 528209922044TraQ protein  TraQ_I
23ECSE_P1-009369059..69763 [-], 705209922045TraP protein  TraP_I
24ECSE_P1-009469763..71052 [-], 1290209922046TraO protein  TraO_I
25ECSE_P1-009571055..72038 [-], 984209922047TraN protein  TraN_I
26ECSE_P1-009672049..72741 [-], 693209922048TraM protein  TraM_I
27ECSE_P1-009772738..73085 [-], 348209922049TraL protein  TraL_I
28ECSE_P1-009873103..76870 [-], 3768209922050DNA primase SogL 
29ECSE_P1-009976960..77511 [-], 552209922051endonuclease 
30ECSE_P1-010077526..77816 [-], 291209922052TraK protein  TraK_I
31ECSE_P1-010177813..78961 [-], 1149209922053TraJ protein  TraJ_I
32ECSE_P1-010278958..79776 [-], 819209922054TraI protein  TraI_I
33ECSE_P1-010379773..80231 [-], 459209922055TraH protein  TraH_I
34ECSE_P1-010480626..81210 [-], 585209922056TraG protein 
35ECSE_P1-010581270..82472 [-], 1203209922057TraF protein 
36ECSE_P1-010682709..83383 [-], 675209922058TraE protein 
37ECSE_P1-010783773..85065 [-], 1293209922059shufflon protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Oshima K; Toh H; Ogura Y; Sasamoto H; Morita H; Park SH; Ooka T; Iyoda S; Taylor TD; Hayashi T; Itoh K; Hattori M (2008). Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult. DNA Res. 15(6):375-86. [PudMed:18931093]