SecReT4
T4SS ID17
StrainSinorhizobium medicae WSM419
Repliconplasmid pSMED02 [Browse all T4SS(s) in this replicon]
AccessionNC_009621
Location1070183..1086980
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_009621
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Smed_61401065775..1066524 [+], 750150378108carbonate dehydratase 
2Smed_61411067101..1068441 [-], 1341150378109aldehyde dehydrogenase 
3Smed_61421068650..1069537 [+], 888150378110hypothetical protein 
4Smed_61431070183..1071829 [+], 1647150378111type IV secretion system protein VirD4  VirD4
5Smed_61451072621..1073346 [-], 726150378112two-component response regulator VirG 
6Smed_61461073399..1074547 [-], 1149150378113GTPase - Sulfate adenylate transferase subunit 1-like protein 
7Smed_61481074992..1075300 [-], 309150378114hypothetical protein 
8Smed_61511076715..1077496 [-], 782150378115hypothetical protein 
9Smed_61521077566..1078606 [-], 1041150378116type IV secretion system protein VirB11  VirB11
10Smed_61531078646..1079764 [-], 1119150378117type IV secretion system protein VirB10  VirB10
11Smed_61541079761..1080642 [-], 882150378118type IV secretion system protein VirB9  VirB9
12Smed_61551080639..1081352 [-], 714150378119type IV secretion system protein VirB8  VirB8
13Smed_61561081339..1081506 [-], 168150378120type IV secretion system lipoprotein VirB7  VirB7
14Smed_61571081539..1082426 [-], 888150378121type IV secretion system protein VirB6  VirB6
15Smed_61581082508..1083191 [-], 684150378122type IV secretion system protein VirB5  VirB5
16Smed_61591083205..1085574 [-], 2370150378123type IV secretion system protein VirB4  VirB4
17Smed_61601085574..1085900 [-], 327150378124type IV secretion system protein VirB3  VirB3
18Smed_61611085897..1086259 [-], 363150378125type IV secretion system pilin subunit VirB2  VirB2
19Smed_61621086273..1086980 [-], 708150378126type IV secretion system lytic transglycosylase VirB1  VirB1
20Smed_61651088723..1089133 [+], 411150378127hypothetical protein 
21Smed_61661089507..1090595 [+], 1089150378128feruloyl esterase 
22Smed_61671090631..1091394 [-], 764150378129transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_009621