SecReT4
T4SS ID172
StrainEscherichia coli plasmid pO113 (NC_007365)
Repliconplasmid pO113 [Browse all T4SS(s) in this replicon]
AccessionNC_007365
Location19755..59660
NameTra_I
Functionconjugation
ClassificationType IVB; Type I
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number111111111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_007365
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1LH001716322..16612 [+], 29173853194hypothetical protein 
2LH0018 (artA)16704..17024 [-], 32173853195hypothetical protein 
3LH0019 (traE)17284..18105 [+], 82273853196hypothetical protein 
4LH0022 (traH)19755..20207 [+], 45373853197lipoprotein  TraH_I
5LH0023 (traI)20204..21040 [+], 83773853198lipoprotein  TraI_I
6LH0024 (traJ)21024..22172 [+], 114973853199ATP-binding protein  TraJ_I
7LH0025 (traK)22169..22459 [+], 29173853200hypothetical protein  TraK_I
8LH0026 (sogL)22523..26539 [+], 401773853201DNA primase competative inhibitor 
9LH0027 (traL)26556..26906 [+], 35173853202hypothetical protein  TraL_I
10LH0028 (traM)26918..27613 [+], 69673853203hypothetical protein  TraM_I
11LH0029 (traN)27624..28598 [+], 97573853204hypothetical protein  TraN_I
12LH0030 (traO)28602..29933 [+], 133273853205hypothetical protein  TraO_I
13LH0031 (traP)29930..30643 [+], 71473853206hypothetical protein  TraP_I
14LH0032 (traQ)30643..31170 [+], 52873853207hypothetical protein  TraQ_I
15LH0033 (traR)31217..31615 [+], 39973853208hypothetical protein  TraR_I
16LH0034 (traS)31672..31923 [+], 25273853209hypothetical protein  TraS_I
17LH0035 (traT)31838..32656 [+], 81973853210hypothetical protein  TraT_I
18LH003632711..32860 [+], 15073853211hypothetical protein 
19LH003733067..33450 [+], 38473853212hypothetical protein 
20LH0038 (traU)33625..36669 [+], 304573853213nucleotide-binding protein  TraU_I
21LH0039 (traV)36669..37286 [+], 61873853214hypothetical protein  TraV_I
22LH0040 (traW)37247..38452 [+], 120673853215lipoprotein  TraW_I
23LH0041 (traX)38449..39018 [+], 57073853216hypothetical protein  TraX_I
24LH0042 (traY)39091..41256 [+], 216673853217hypothetical protein  TraY_I
25LH0043 (excA)41327..41977 [+], 65173853218surface exclusion protein 
26LH004442251..43213 [+], 96373853219hypothetical protein 
27LH004543162..43836 [+], 67573853220hypothetical protein 
28LH0046 (pndA)43974..44126 [-], 15373853221post-segregation killing protein 
29LH0047 (pndC)43981..44265 [-], 28573853222plasmid stability protein 
30LH004844340..44702 [+], 36373853223hypothetical protein 
31LH004944795..46339 [-], 154573853224membrane-associated, metal-dependent hydrolase 
32LH005046531..46986 [-], 45673853225hypothetical protein 
33LH005147074..47697 [-], 62473853226hypothetical protein 
34LH0053 (epeA)48716..52795 [+], 408073853227autotransporter protease 
35LH005753251..53610 [-], 36073853228hypothetical protein 
36LH005653302..53667 [+], 36673853229hypothetical protein 
37LH005853677..53868 [+], 19273853230hypothetical protein 
38LH005953896..54207 [+], 31273853231neurotensin receptor R8 
39LH0060 (trbA)54990..56261 [+], 127273853232conjugal transfer protein  TrbA_I
40LH0061 (trbB)56258..57376 [+], 111973853233conjugal transfer protein  TrbB_I
41LH0062 (trbC)57357..59660 [+], 230473853234conjugal transfer protein  TrbC_I
42LH006359786..60088 [+], 30373853235hypothetical protein 
43LH006460165..60614 [-], 45073853236hypothetical protein 
44LH0065 (nikB)60682..63393 [-], 271273853237relaxase 
45LH0066 (nikA)63405..63824 [-], 42073853238relaxosome component 
46LH0067 (yggA)63968..64303 [+], 33673853239hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Leyton DL; Sloan J; Hill RE; Doughty S; Hartland EL (2003). Transfer region of pO113 from enterohemorrhagic Escherichia coli: similarity with R64 and identification of a novel plasmid-encoded autotransporter, EpeA. Infect Immun. 71(11):6307-19. [PudMed:14573650]