SecReT4
T4SS ID182
StrainYersinia pseudotuberculosis plasmid pGDT4 (NC_011759)
Repliconplasmid pGDT4 [Browse all T4SS(s) in this replicon]
AccessionNC_011759
Location3657..22587; 91198..93901
NameTra_I
Functionconjugation
ClassificationType IVB; Type I
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number110110101
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_011759
Region 1: 3657..22587
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pGDT4_000179..3648 [+], 3570218534616DNA primase 
2pGDT4_00023657..4088 [+], 432218534617TraL protein  TraL_I
3pGDT4_00034133..4816 [+], 684218534618TraM protein  TraM_I
4pGDT4_00044830..5822 [+], 993218534619TraN protein  TraN_I
5pGDT4_00055826..7142 [+], 1317218534620TraO protein  TraO_I
6pGDT4_00067160..7960 [+], 801218534621TraP protein  TraP_I
7pGDT4_00077971..8510 [+], 540218534622TraQ protein  TraQ_I
8pGDT4_00088651..9046 [+], 396218534623TraR protein  TraR_I
9pGDT4_00099107..9565 [+], 459218534624hypothetical protein 
10pGDT4_00109620..10237 [+], 618218534625TraT protein  TraT_I
11pGDT4_001110239..13313 [+], 3075218534626TraU protein  TraU_I
12pGDT4_001213322..14521 [+], 1200218534627TraW protein  TraW_I
13pGDT4_001314553..17285 [+], 2733364556392TraXY protein  TraY_I
14pGDT4_001417364..17999 [+], 636218534629exclusion-determining protein 
15pGDT4_001518107..19399 [+], 1293218534630TrbA protein  TrbA_I
16pGDT4_001619414..20391 [+], 978218534631TrbB protein  TrbB_I
17pGDT4_001720404..22587 [+], 2184218534632TrbC protein  TrbC_I
18pGDT4_001822598..23128 [+], 531218534633putative endonuclease 
19pGDT4_001923149..23466 [+], 318218534634hypothetical protein 
20pGDT4_002023554..23736 [+], 183218534635hypothetical protein 
21pGDT4_002124098..24670 [-], 573218534636hypothetical protein 
22pGDT4_002224708..26603 [-], 1896218534637relaxase/mobilization nuclease MobA 
23pGDT4_002326606..26929 [-], 324218534638mobilization protein MobB 
24pGDT4_002427188..27511 [+], 324218534639MobC protein 
 
Region 2: 91198..93901
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pGDT4_009386926..87864 [+], 939218534707PilR protein 
2pGDT4_009487928..88515 [+], 588218534708PilS protein 
3pGDT4_009588585..89076 [+], 492218534709PilT protein 
4pGDT4_009689106..89753 [+], 648218534710PilU protein 
5pGDT4_009789810..91147 [+], 1338218534711PilV protein 
6pGDT4_009891198..91653 [+], 456218534712TraH protein  TraH_I
7pGDT4_009991731..92438 [+], 708218534713TraI protein  TraI_I
8pGDT4_010092443..93609 [+], 1167218534714TraJ protein  TraJ_I
9pGDT4_010193641..93901 [+], 261218534715TraK protein  TraK_I
10pGDT4_010293981..94463 [+], 483218534716hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Lesic B; Zouine M; Ducos-Galand M; Huon C; Rosso ML; Prevost MC; Mazel D; Carniel E (2012). A natural system of chromosome transfer in Yersinia pseudotuberculosis. PLoS Genet. 8(3):e1002529. [PudMed:22412380]