SecReT4
T4SS ID184
StrainSalmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Repliconplasmid pSC138 [Browse all T4SS(s) in this replicon]
AccessionNC_006856
Location52737..78002
NameTra_I
FunctionNA
ClassificationType IVB; Type I
insolico This T4SS is identified in this study.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number000011111
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number100011111
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_006856
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SC060 (paa4)47877..48614 [+], 73860115574resolvase 
2SC06148611..48835 [+], 22560115575hypothetical protein 
3SC062 (insA)49264..49539 [+], 27660115576transposition protein 
4SC063 (insB)49458..49961 [+], 50460115577transposition protein 
5SC06450174..50815 [+], 64260115578hypothetical protein 
6SC065 (stra)51043..51936 [+], 89460115579StrA 
7SC066 (tnpA)51955..52677 [+], 72360115580hypothetical protein 
8SC067 (traQ)52737..53264 [-], 52860115581TraQ-like protein  TraQ_I
9SC068 (traP)53264..53968 [-], 70560115582TraP-like protein  TraP_I
10SC069 (traO)53968..55257 [-], 129060115583TraO-like protein  TraO_I
11SC070 (traN)55260..56243 [-], 98460115584TraN-like protein  TraN_I
12SC071 (traM)56254..56946 [-], 69360115585TraM-like protein  TraM_I
13SC072 (traL)56943..57290 [-], 34860115586TraL-like protein  TraL_I
14SC073 (sogS)57308..57592 [-], 28560115587DNA primase 
15SC074 (tnpA)57632..58237 [-], 60660115588transposase 
16SC075 (traU)58327..60237 [+], 191160115589TraU-like protein  TraU_I
17SC076 (traV)60237..60851 [+], 61560115590TraV-like protein  TraV_I
18SC077 (traW)60818..62020 [+], 120360115591lipoprotein  TraW_I
19SC078 (traX)62049..62633 [+], 58560115592TraX-like protein  TraX_I
20SC079 (traY)62661..64898 [+], 223860115593integral membrane protein  TraY_I
21SC080 (exeAB)64969..65631 [+], 66360115594surface exclusion protein 
22SC08165703..65912 [-], 21060115595hypothetical protein 
23SC08266196..66480 [+], 28560115596hypothetical protein 
24SC08366545..66841 [-], 29760115597hypothetical protein 
25SC084 (pndA)67141..67392 [+], 25260115598hypothetical protein 
26SC08567389..67487 [+], 9960115599hypothetical protein 
27SC086 (pnd)67692..67784 [+], 9360115600hypothetical protein 
28SC08767864..68007 [+], 14460115601hypothetical protein 
29SC089 (tnpA)68464..69726 [+], 126360115602transposase 
30SC090 (ampC)70050..71195 [+], 1146162139492beta-lactamase 
31SC091 (blc)71289..71822 [+], 53460115604outer membrane lipoprotein Blc 
32SC092 (sugE)71819..72259 [-], 44160115605SugE protein 
33SC09473205..73297 [+], 9360115606hypothetical protein 
34SC095 (trbA)73421..74629 [+], 120960115607TrbA-like protein  TrbA_I
35SC096 (trbB)74648..75718 [+], 107160115608hypothetical protein  TrbB_I
36SC097 (trbC)75711..78002 [+], 229260115609TrbC-like protein  TrbC_I
37SC09877821..77916 [-], 9660115610hypothetical protein 
38SC099 (nikB)78040..80739 [-], 270060115611NikB-like protein 
39SC100 (nikA)80750..81082 [-], 33360115612relaxosome component 
40SC101 (mobC)81316..81591 [+], 27660115613MobC-like protein 
41SC102 (ydiA)81739..82590 [-], 85260115614YdiA 
42SC10482592..82966 [+], 37560115615hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_006856