SecReT4
T4SS ID185
StrainCandidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_012751
Location951294..973321
NameTra_I
FunctionNA
ClassificationType IVB; Type I
insolico This T4SS is identified in this study.

T4SS components
ComponentTraH_ITraI_ITraJ_ITraK_ITraL_ITraM_ITraN_ITraO_ITraP_I
Number111111110
ComponentTraQ_ITraR_ITraS_ITraT_ITraU_ITraV_ITraW_ITraX_ITraY_I
Number000010110
ComponentTrbA_ITrbB_ITrbC_I
Number111

The information of T4SS components from NC_012751
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1HDEF_0950 (pilS2_1)946975..947556 [+], 582238898121PilS2 type IV pilus biosynthesis protein 
2HDEF_0951947596..947895 [-], 300238898122addiction module 
3HDEF_0952947883..948173 [-], 291238898123hypothetical protein 
4HDEF_0953 (pilV_1)948347..949615 [+], 1269238898124PilV type IV pilus minor pilin subunit 
5HDEF_0954 (pilM_1)949665..950096 [+], 432238898125PilM type IV pilus biogenesis/secretion protein 
6HDEF_0955950099..950719 [+], 621238898126hypothetical protein 
7HDEF_0956 (pilT_2)950762..951226 [+], 465238898127twitching motility protein PilT 
8HDEF_0957 (traH_1)951294..951737 [+], 444238898128TraH conjugal transfer protein  TraH_I
9HDEF_0958 (traI_1)951752..952540 [+], 789238898129TraI conjugal transfer protein  TraI_I
10HDEF_0959 (traJ_1)952527..953696 [+], 1170238898130TraJ conjugal transfer protein  TraJ_I
11HDEF_0960953691..954098 [-], 408238898131hypothetical protein 
12HDEF_0961954107..954349 [-], 243238898132hypothetical protein 
13HDEF_0962 (traK_1)954455..954715 [+], 261238898133TraK conjugal transfer protein  TraK_I
14HDEF_0963 (traC_1)954733..957219 [+], 2487238898134DNA primase TraC 
15HDEF_0965 (traL)957505..957936 [+], 432238898135TraL conjugal transfer protein  TraL_I
16HDEF_0966 (traM_1)957961..958632 [+], 672238898136TraM conjugal transfer protein  TraM_I
17HDEF_0967 (traN)958629..959633 [+], 1005238898137TraN conjugal transfer protein  TraN_I
18HDEF_0968 (traO)959643..960818 [+], 1176238898138TraO conjugal transfer protein  TraO_I
19HDEF_0969960815..961231 [+], 417238898139hypothetical protein 
20HDEF_0970 (traU)961224..964280 [+], 3057238898140TraU conjugal transfer protein  TraU_I
21HDEF_0971 (traW)964338..965477 [+], 1140238898141TraW conjugal transfer protein  TraW_I
22HDEF_0972 (traX)965470..966018 [+], 549238898142TraX conjugal transfer protein  TraX_I
23HDEF_0974968339..968977 [+], 639238898143surface exclusion protein 
24HDEF_0975969054..969308 [+], 255238898144hypothetical protein 
25HDEF_0976969318..969734 [+], 417238898145hypothetical protein 
26HDEF_0977969808..969993 [+], 186238898146hypothetical protein 
27HDEF_0978 (trbA)970063..971073 [+], 1011238898147TrbA conjugal transfer protein  TrbA_I
28HDEF_0979 (trbB)971149..972081 [+], 933238898148TrbB conjugal transfer protein  TrbB_I
29HDEF_0980 (trbC_2)972074..973321 [+], 1248238898149TrbC conjugal transfer protein  TrbC_I
30HDEF_0981973394..973858 [-], 465238898150reverse transcriptase 
31HDEF_0982974478..976160 [+], 1683238898151reverse transcriptase 
32HDEF_0983976237..977421 [-], 1185238898152reverse transcriptase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_012751