SecReT4
T4SS ID190
StrainAgrobacterium radiobacter K84
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_011985
Location3865959..3875529; 3889956..3891869
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_011985
Region 1: 3865959..3875529
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Arad_47763861191..3862477 [+], 1287222087798UDP-glucose 6-dehydrogenase/GDP-mannose 6-dehydrogenase protein 
2Arad_47773862485..3863348 [-], 864222087799UDP-glucose 4-epimerase 
3Arad_4778 (lpsB1)3863624..3864199 [+], 576222087800galactosyltransferase 
4Arad_47793864245..3865738 [+], 1494222087801synthesis of o-antigen protein 
5Arad_4780 (avhB11)3865959..3866948 [-], 990222087802type IV secretion protein AvhB11  VirB11
6Arad_4781 (avhB10)3866957..3868126 [-], 1170222087803type IV secretion protein AvhB10  VirB10
7Arad_4784 (avhB9)3868116..3869003 [-], 888222087805type IV secretion protein AvhB9  VirB9
8Arad_4783 (avhB8)3869000..3869671 [-], 672222087804type IV secretion protein AvhB8  VirB8
9Arad_4785 (avhB7)3869671..3869958 [-], 288222087806type IV secretion protein AvhB7  VirB7
10Arad_4786 (avhB6)3869998..3870930 [-], 933222087807type IV secretion protein AvhB6  VirB6
11Arad_4788 (avhB5)3871164..3871859 [-], 696222087808type IV secretion protein AvhB5  VirB5
12Arad_4789 (avhB4)3871859..3874246 [-], 2388222087809type IV secretion protein AvhB4  VirB4
13Arad_4792 (avhB3)3874218..3874556 [-], 339222087811type IV secretion protein AvhB3  VirB3
14Arad_4790 (avhB2)3874562..3874864 [-], 303222087810type IV secretion protein avhB2  VirB2
15Arad_4793 (avhB1)3874861..3875529 [-], 669222087812type IV secretion protein AvhB1  VirB1
16Arad_47943875532..3876071 [-], 540222087813hypothetical protein 
17Arad_4795 (rctA)3876311..3876523 [+], 213222087814transcriptional regulator 
18Arad_4797 (nocR)3876870..3877772 [-], 903222087815nopaline catabolism transcriptional regulator protein 
19Arad_4799 (nocQ)3878068..3878736 [+], 669222087816nopaline ABC transporter 
20Arad_4800 (nocM)3878741..3879577 [+], 837222087817opine ABC transporter permease 
21Arad_4801 (nocT)3879570..3880418 [+], 849222087818nopaline binding protein of ABC transporter 
 
Region 2: 3889956..3891869
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Arad_48103885409..3886656 [-], 1248222087825transporter protein 
2Arad_48113886800..3887690 [-], 891222087826transcriptional regulator 
3Arad_48123888022..3889017 [+], 996222087827hypothetical protein 
4Arad_48133889658..3889819 [+], 162222087828hypothetical protein 
5Arad_4814 (traG)3889956..3891869 [+], 1914222087829conjugal transfer coupling protein TraG  VirD4
6Arad_48163892630..3893766 [-], 1137222087830glycosyltransferase 
7Arad_48193894878..3895243 [+], 366222087831hypothetical protein 
8Arad_48203895240..3895593 [+], 354222087832transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011985